Nice, that means that cmake configuration could be improved for avoid error, but post installation is fine.
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Package Details: dolfinx 0.7.3-1
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Git Clone URL: | https://aur.archlinux.org/dolfinx.git (read-only, click to copy) |
---|---|
Package Base: | dolfinx |
Description: | Next generation FEniCS problem solving environment |
Upstream URL: | https://github.com/FEniCS/dolfinx |
Keywords: | fenics finite-element-methods parallel-computing partial-differential-equations |
Licenses: | GPL-3.0-or-later, LGPL-3.0-or-later |
Submitter: | carlosal1015 |
Maintainer: | carlosal1015 (AutoUpdateBot) |
Last Packager: | carlosal1015 |
Votes: | 3 |
Popularity: | 0.000007 |
First Submitted: | 2022-04-29 14:12 (UTC) |
Last Updated: | 2024-02-29 21:02 (UTC) |
Dependencies (11)
- boost (boost-gitAUR)
- petscAUR (petsc-gitAUR, petsc-complexAUR)
- pugixml (pugixml-gitAUR)
- python-fenics-ffcxAUR
- scotchAUR (scotch-gitAUR)
- cmake (cmake-gitAUR) (make)
- catch2 (catch2-gitAUR) (check)
- adios2 (adios2-gitAUR) (optional) – for use ADIOS2 writer
- kahipAUR (optional) – for compute graph partition in parallel
- parmetisAUR (parmetis-gitAUR) (optional) – for parallel graph partitioning
- slepcAUR (slepc-gitAUR) (optional) – for use SLEPc eigen solver
Required by (1)
Sources (1)
Latest Comments
carlosal1015 commented on 2023-12-28 03:01 (UTC)
zhushazang commented on 2023-12-28 02:58 (UTC)
Installing slepc after dolfinx and running the script:
EPS Object: 1 MPI process type: krylovschur 50% of basis vectors kept after restart using the locking variant problem type: generalized symmetric eigenvalue problem selected portion of the spectrum: closest to target: 5. (in magnitude) postprocessing eigenvectors with purification number of eigenvalues (nev): 12 number of column vectors (ncv): 27 maximum dimension of projected problem (mpd): 27 maximum number of iterations: 131 tolerance: 1e-08 convergence test: relative to the eigenvalue BV Object: 1 MPI process type: mat 28 columns of global length 1776 vector orthogonalization method: classical Gram-Schmidt orthogonalization refinement: if needed (eta: 0.7071) block orthogonalization method: GS non-standard inner product tolerance for definite inner product: 2.22045e-15 inner product matrix: Mat Object: (st_) 1 MPI process type: seqaij rows=1776, cols=1776 total: nonzeros=8688, allocated nonzeros=8688 total number of mallocs used during MatSetValues calls=0 not using I-node routines doing matmult as a single matrix-matrix product DS Object: 1 MPI process type: hep solving the problem with: Implicit QR method (steqr) ST Object: 1 MPI process type: shift shift: 0. number of matrices: 2 nonzero pattern of the matrices: UNKNOWN KSP Object: (st) 1 MPI process type: preonly maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (st_) 1 MPI process type: lu out-of-place factorization tolerance for zero pivot 2.22045e-14 matrix ordering: nd factor fill ratio given 5., needed 5.42703 Factored matrix follows: Mat Object: (st_) 1 MPI process type: seqaij rows=1776, cols=1776 package used to perform factorization: petsc total: nonzeros=47150, allocated nonzeros=47150 not using I-node routines linear system matrix = precond matrix: Mat Object: (st_) 1 MPI process type: seqaij rows=1776, cols=1776 total: nonzeros=8688, allocated nonzeros=8688 total number of mallocs used during MatSetValues calls=0 not using I-node routines
carlosal1015 commented on 2023-12-27 18:31 (UTC)
No worries @zhushazang, did you see this message error
-- Found PkgConfig: /usr/sbin/pkg-config (found version "2.1.0")
-- Checking for one of the modules 'PETSc;petsc'
-- Checking for one of the modules 'SLEPc;slepc'
-- Configuring done (4.3s)
CMake Error in CMakeLists.txt:
Imported target "dolfinx" includes non-existent path
"/tmp/makepkg/slepc/pkg/slepc/opt/slepc/linux-c-opt/include"
in its INTERFACE_INCLUDE_DIRECTORIES. Possible reasons include:
* The path was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and references files it does not
provide.
CMake Error in CMakeLists.txt:
Imported target "dolfinx" includes non-existent path
"/tmp/makepkg/slepc/pkg/slepc/opt/slepc/linux-c-opt/include"
in its INTERFACE_INCLUDE_DIRECTORIES. Possible reasons include:
* The path was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and references files it does not
provide.
-- Generating done (0.0s)
CMake Generate step failed. Build files cannot be regenerated correctly.
What happens if you install SLEPc after python-fenics-dolfinx and run this script?
zhushazang commented on 2023-12-27 13:36 (UTC)
Hello @carlosal1015, sorry for the delay in responding, I forgot to check the option to be notified. Anyway, I confirm that I was able to perform the installation after removing slepc.
Yours sincerely
carlosal1015 commented on 2023-11-26 18:44 (UTC)
Hi @zhushazang, I have a question, the installation works without slepc installed?
zhushazang commented on 2023-11-25 01:00 (UTC)
Hello there, unable to install 0.7.2-1 version with this final error:
CMake Error in CMakeLists.txt: Imported target "dolfinx" includes non-existent path
"/home/rodolfo/.cache/yay/slepc/pkg/slepc/opt/slepc/linux-c-opt/include"
in its INTERFACE_INCLUDE_DIRECTORIES. Possible reasons include:
-
The path was deleted, renamed, or moved to another location.
-
An install or uninstall procedure did not complete successfully.
-
The installation package was faulty and references files it does not provide.
==== CMake Error in CMakeLists.txt: Imported target "dolfinx" includes non-existent path
"/home/rodolfo/.cache/yay/slepc/pkg/slepc/opt/slepc/linux-c-opt/include"
in its INTERFACE_INCLUDE_DIRECTORIES. Possible reasons include:
-
The path was deleted, renamed, or moved to another location.
-
An install or uninstall procedure did not complete successfully.
-
The installation package was faulty and references files it does not provide.
-- Generating done (0.0s) CMake Generate step failed. Build files cannot be regenerated correctly. ======
But there is "/opt/slepc/linux-c-opt/include" directory.
Best Regards
P.S.: If this is not the channel to report issues, please tell me where. Thanks
carlosal1015 commented on 2022-09-20 03:45 (UTC)
Pre-built binaries of this package and its dependencies can be found in the arch4edu repository.
Pinned Comments
carlosal1015 commented on 2022-09-20 03:45 (UTC)
Pre-built binaries of this package and its dependencies can be found in the arch4edu repository.