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authorPhilipp A2020-10-21 16:45:22 +0200
committerPhilipp A2020-10-21 16:45:22 +0200
commit9856d9a52b10f78daafef589f8686b1ac33090aa (patch)
tree4c3c69e4dc8f0f2c2ba7f56307e701d07ab11779
parentfc2e7956abf57635cd228df8721dd2e8a957c5e6 (diff)
downloadaur-hisat2.tar.gz
v2.2.1
-rw-r--r--.SRCINFO9
-rw-r--r--.gitignore3
-rw-r--r--PKGBUILD9
3 files changed, 12 insertions, 9 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 77115dd50094..0d93076051eb 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,12 +1,13 @@
pkgbase = hisat2
pkgdesc = A fast and sensitive alignment program for mapping next-generation sequencing reads against genomes
- pkgver = 2.2.0
+ pkgver = 2.2.1
pkgrel = 1
url = https://ccb.jhu.edu/software/hisat2
arch = x86_64
- license = GPLv3
- source = hisat2-2.2.0-source.zip::https://cloud.biohpc.swmed.edu/index.php/s/hisat2-220-source/download
- sha256sums = 0dd55168853b82c1b085f79ed793dd029db163773f52272d7eb51b3b5e4a4cdd
+ license = GPL3
+ optdepends = python: To use the wrapper scripts instead of -l and -s variants
+ source = hisat2-2.2.1-source.zip::https://cloud.biohpc.swmed.edu/index.php/s/fE9QCsX3NH4QwBi/download
+ sha256sums = 48e933330d4d8470d2b3dfe7ec3918f2e98a75f7381891e23b7df1fb4f135eb1
pkgname = hisat2
diff --git a/.gitignore b/.gitignore
index 1d41ea0663a1..fcc7354677c7 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,4 +1,5 @@
/pkg/
/src/
-/*.pkg.tar.xz
+/*.pkg.tar.*
/*.zip
+/*.log
diff --git a/PKGBUILD b/PKGBUILD
index 8354d4338562..41b95c281af7 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,12 +1,13 @@
pkgname=hisat2
-pkgver=2.2.0
+pkgver=2.2.1
pkgrel=1
pkgdesc='A fast and sensitive alignment program for mapping next-generation sequencing reads against genomes'
url="https://ccb.jhu.edu/software/$pkgname"
-license=(GPLv3)
+license=(GPL3)
arch=(x86_64)
-source=("$pkgname-$pkgver-source.zip::https://cloud.biohpc.swmed.edu/index.php/s/$pkgname-${pkgver//./}-source/download")
-sha256sums=('0dd55168853b82c1b085f79ed793dd029db163773f52272d7eb51b3b5e4a4cdd')
+optdepends=('python: To use the wrapper scripts instead of -l and -s variants')
+source=("$pkgname-$pkgver-source.zip::https://cloud.biohpc.swmed.edu/index.php/s/fE9QCsX3NH4QwBi/download")
+sha256sums=('48e933330d4d8470d2b3dfe7ec3918f2e98a75f7381891e23b7df1fb4f135eb1')
build() {
cd "$srcdir/$pkgname-$pkgver"