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| author | Lev Levitsky | 2023-09-05 18:10:58 +0200 |
|---|---|---|
| committer | Lev Levitsky | 2023-09-05 18:10:58 +0200 |
| commit | 58a02b85d47876aecf70e7636f67f365d7e23e53 (patch) | |
| tree | c73ef2a5c07ed21f3d54b320302370c04e33864f | |
| download | aur-msamanda-bin.tar.gz | |
3.0.21.049
| -rw-r--r-- | .SRCINFO | 17 | ||||
| -rw-r--r-- | PKGBUILD | 25 |
2 files changed, 42 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..e800150028b0 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,17 @@ +pkgbase = msamanda-bin + pkgdesc = A scoring system to identify peptides out of tandem mass spectrometry data using a database of known proteins + pkgver = 3.0.21.049 + pkgrel = 1 + url = http://ms.imp.ac.at/index.php?action=ms-amanda + arch = any + license = custom + provides = msamanda + provides = percolator + conflicts = msamanda + conflicts = percolator + conflicts = percolator-bin + options = !strip + source = https://ms.imp.ac.at/index.php?file=msamanda/MSAmanda_Linux_3.0.21.049.tar.gz + sha256sums = 2479fd56576b68bbc582d2117a2e6bffa67d8e9e2df538d156371c6bf82c8f86 + +pkgname = msamanda-bin diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..07d55202f584 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,25 @@ +# Maintainer: Lev Levitsky <levlev@mail.ru> +pkgname=msamanda-bin +provides=(msamanda percolator) +conflicts=(msamanda percolator percolator-bin) +_name="MSAmanda_Linux" +pkgver=3.0.21.049 +pkgrel=1 +pkgdesc="A scoring system to identify peptides out of tandem mass spectrometry data using a database of known proteins" +arch=('any') +url="http://ms.imp.ac.at/index.php?action=ms-amanda" +license=('custom') +depends=() +options=(!strip) +source=("https://ms.imp.ac.at/index.php?file=msamanda/${_name}_${pkgver}.tar.gz") +sha256sums=('2479fd56576b68bbc582d2117a2e6bffa67d8e9e2df538d156371c6bf82c8f86') + +package() { + mkdir -p "$pkgdir/opt/MSAmanda" + cp -rt "$pkgdir/opt/MSAmanda" "${srcdir}/${_name}_${pkgver}"/* + mkdir -p "$pkgdir/usr/share/licenses/MSAmanda" + mv "$pkgdir/opt/MSAmanda/license.txt" "$pkgdir/usr/share/licenses/MSAmanda" + mkdir -p "$pkgdir/usr/bin" + ln -st "${pkgdir}/usr/bin" /opt/MSAmanda/percolator/{percolator,qvality} + ln -st "${pkgdir}/usr/bin" /opt/MSAmanda/MSAmanda +} |