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author | BioArchLinuxBot | 2024-05-10 18:12:52 +0000 |
---|---|---|
committer | BioArchLinuxBot | 2024-05-10 18:12:52 +0000 |
commit | 014feebfab1fbcb3652c8069a255782bc07e2047 (patch) | |
tree | 33896ff5d2c1925ab5c7bb1628a38c2f509e26d4 | |
parent | d51a10ba0f9f6db0fe2a2a597a922598b8253bcb (diff) | |
download | aur-r-bionar.tar.gz |
[lilac] updated to 1.6.0-1
-rw-r--r-- | .SRCINFO | 11 | ||||
-rw-r--r-- | PKGBUILD | 16 | ||||
-rw-r--r-- | fix-tests.patch | 26 |
3 files changed, 8 insertions, 45 deletions
@@ -1,6 +1,6 @@ pkgbase = r-bionar pkgdesc = Biological Network Analysis in R - pkgver = 1.4.4 + pkgver = 1.6.0 pkgrel = 1 url = https://bioconductor.org/packages/BioNAR arch = any @@ -40,11 +40,8 @@ pkgbase = r-bionar optdepends = r-rmarkdown optdepends = r-testthat optdepends = r-vdiffr - source = https://bioconductor.org/packages/release/bioc/src/contrib/BioNAR_1.4.4.tar.gz - source = fix-tests.patch - md5sums = 60ea801489d5db3a2bb2e00d1acc1056 - md5sums = 4a0d1366b4a7d786d07d1553c9a7899e - b2sums = 9a2a1a98ccff8e9d8054295f5b53321dcd03f9d996a1931f4e6a51c98af378ac2d0e0ef9a1ff51e43b15ff795ac523305037197d6b0e63ddd2f4aeeb28f6ff34 - b2sums = 5bcc25f82c45ce8442351f73a851f34bf2c76b286dd708141882f928876d02fba213e8760146cd3115d298985aa062fb67d9a5d89ea7a62687d65fdfb3349a84 + source = https://bioconductor.org/packages/release/bioc/src/contrib/BioNAR_1.6.0.tar.gz + md5sums = 09f2f54ad370dfbd2c42d2921f886102 + b2sums = 122ef665600aeefde372364f7e0b7234090cf95248e5aefbcf10225e250db2a0e2d14239965f371dd3979b5ef7e157d89294428b749f62c13b6b8b495ae0f92f pkgname = r-bionar @@ -1,7 +1,7 @@ # Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com> _pkgname=BioNAR -_pkgver=1.4.4 +_pkgver=1.6.0 pkgname=r-${_pkgname,,} pkgver=${_pkgver//-/.} pkgrel=1 @@ -50,17 +50,9 @@ optdepends=( r-testthat r-vdiffr ) -source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz" - "fix-tests.patch") -md5sums=('60ea801489d5db3a2bb2e00d1acc1056' - '4a0d1366b4a7d786d07d1553c9a7899e') -b2sums=('9a2a1a98ccff8e9d8054295f5b53321dcd03f9d996a1931f4e6a51c98af378ac2d0e0ef9a1ff51e43b15ff795ac523305037197d6b0e63ddd2f4aeeb28f6ff34' - '5bcc25f82c45ce8442351f73a851f34bf2c76b286dd708141882f928876d02fba213e8760146cd3115d298985aa062fb67d9a5d89ea7a62687d65fdfb3349a84') - -prepare() { - # fix test snapshots - patch -Np1 -i fix-tests.patch -} +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +md5sums=('09f2f54ad370dfbd2c42d2921f886102') +b2sums=('122ef665600aeefde372364f7e0b7234090cf95248e5aefbcf10225e250db2a0e2d14239965f371dd3979b5ef7e157d89294428b749f62c13b6b8b495ae0f92f') build() { mkdir build diff --git a/fix-tests.patch b/fix-tests.patch deleted file mode 100644 index 442ed661adc3..000000000000 --- a/fix-tests.patch +++ /dev/null @@ -1,26 +0,0 @@ -diff --git a/BioNAR/tests/testthat/_snaps/bridgeness/karatebridgenessplot.svg b/BioNAR/tests/testthat/_snaps/bridgeness/karatebridgenessplot.svg -index eacd23f..4feb787 100644 ---- a/BioNAR/tests/testthat/_snaps/bridgeness/karatebridgenessplot.svg -+++ b/BioNAR/tests/testthat/_snaps/bridgeness/karatebridgenessplot.svg -@@ -18,7 +18,7 @@ - </clipPath> - </defs> - <g clip-path='url(#cpMC4wMHw3MjAuMDB8MC4wMHw1NzYuMDA=)'> --<rect x='0.00' y='0.00' width='720.00' height='576.00' style='stroke-width: 1.07; stroke: #FFFFFF; fill: #FFFFFF;' /> -+<rect x='0.000000000000064' y='0.00' width='720.00' height='576.00' style='stroke-width: 1.07; stroke: #FFFFFF; fill: #FFFFFF;' /> - </g> - <defs> - <clipPath id='cpNTQuOTF8NzE0LjUyfDIyLjc4fDUzMC4zMw=='> -diff --git a/BioNAR/tests/testthat/_snaps/bridgeness/presynbridgenessplot.svg b/BioNAR/tests/testthat/_snaps/bridgeness/presynbridgenessplot.svg -index de47e4c..7ef78e1 100644 ---- a/BioNAR/tests/testthat/_snaps/bridgeness/presynbridgenessplot.svg -+++ b/BioNAR/tests/testthat/_snaps/bridgeness/presynbridgenessplot.svg -@@ -18,7 +18,7 @@ - </clipPath> - </defs> - <g clip-path='url(#cpMC4wMHw3MjAuMDB8MC4wMHw1NzYuMDA=)'> --<rect x='0.00' y='0.00' width='720.00' height='576.00' style='stroke-width: 1.07; stroke: #FFFFFF; fill: #FFFFFF;' /> -+<rect x='0.000000000000064' y='0.00' width='720.00' height='576.00' style='stroke-width: 1.07; stroke: #FFFFFF; fill: #FFFFFF;' /> - </g> - <defs> - <clipPath id='cpNTQuOTF8NzE0LjUyfDIyLjc4fDUzMC4zMw=='> |