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| author | BioArchLinuxBot | 2024-05-05 18:06:47 +0000 |
|---|---|---|
| committer | BioArchLinuxBot | 2024-05-05 18:06:47 +0000 |
| commit | a71c6d836b6d8a00aab23b49b9cbd9dfdbe994c0 (patch) | |
| tree | 477c6ef61f6d9c36e4d16518aeb36ba515681110 | |
| parent | 442cf5d608eefb4d20d639cbe620881c9f3276db (diff) | |
| download | aur-r-gdnax.tar.gz | |
[lilac] updated to 1.2.0-1
| -rw-r--r-- | .SRCINFO | 10 | ||||
| -rw-r--r-- | PKGBUILD | 8 |
2 files changed, 11 insertions, 7 deletions
@@ -1,6 +1,6 @@ pkgbase = r-gdnax pkgdesc = Diagnostics for assessing genomic DNA contamination in RNA-seq data - pkgver = 1.0.2 + pkgver = 1.2.0 pkgrel = 1 url = https://bioconductor.org/packages/gDNAx arch = any @@ -14,12 +14,14 @@ pkgbase = r-gdnax depends = r-biocparallel depends = r-biostrings depends = r-bitops + depends = r-cli depends = r-genomeinfodb depends = r-genomicalignments depends = r-genomicfeatures depends = r-genomicfiles depends = r-genomicranges depends = r-iranges + depends = r-matrixstats depends = r-plotrix depends = r-rcolorbrewer depends = r-rsamtools @@ -31,8 +33,8 @@ pkgbase = r-gdnax optdepends = r-rmarkdown optdepends = r-runit optdepends = r-txdb.hsapiens.ucsc.hg38.knowngene - source = https://bioconductor.org/packages/release/bioc/src/contrib/gDNAx_1.0.2.tar.gz - md5sums = e8937acc1de3e0e87a81c446a928d98f - b2sums = c94d2bc705c20d54434cafb3123c0907eb0e6d2ca4938b02683a33f5929523dedecf38b8ce8d8cfdce28f6e851e6efedc57ea536ab8fd15f0626ebc75b7f272f + source = https://bioconductor.org/packages/release/bioc/src/contrib/gDNAx_1.2.0.tar.gz + md5sums = 29ed4f29d63435c208ab3c9eaa541b56 + b2sums = d22a4cf687d8704c682a260714a8eb249407e7a8a8c9d0d7ea5f9644ae4590c5a0496c5ee68d22d892b28968489da5d4fec5f0a49dd55e1599a7b5449ab225c4 pkgname = r-gdnax @@ -1,7 +1,7 @@ # Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com> _pkgname=gDNAx -_pkgver=1.0.2 +_pkgver=1.2.0 pkgname=r-${_pkgname,,} pkgver=${_pkgver//-/.} pkgrel=1 @@ -16,12 +16,14 @@ depends=( r-biocparallel r-biostrings r-bitops + r-cli r-genomeinfodb r-genomicalignments r-genomicfeatures r-genomicfiles r-genomicranges r-iranges + r-matrixstats r-plotrix r-rcolorbrewer r-rsamtools @@ -42,8 +44,8 @@ optdepends=( r-txdb.hsapiens.ucsc.hg38.knowngene ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -md5sums=('e8937acc1de3e0e87a81c446a928d98f') -b2sums=('c94d2bc705c20d54434cafb3123c0907eb0e6d2ca4938b02683a33f5929523dedecf38b8ce8d8cfdce28f6e851e6efedc57ea536ab8fd15f0626ebc75b7f272f') +md5sums=('29ed4f29d63435c208ab3c9eaa541b56') +b2sums=('d22a4cf687d8704c682a260714a8eb249407e7a8a8c9d0d7ea5f9644ae4590c5a0496c5ee68d22d892b28968489da5d4fec5f0a49dd55e1599a7b5449ab225c4') build() { mkdir build |