summarylogtreecommitdiffstats
diff options
context:
space:
mode:
authorBioArchLinuxBot2024-05-03 18:20:14 +0000
committerBioArchLinuxBot2024-05-03 18:20:14 +0000
commitccca8f5852a989f2b6f752fb3bc1aeae6aa6cf84 (patch)
treebcdba6931c09ddb4a7d3b28c7125339eeed6efbc
parentf3d21728aaca1ac7397d89eb1525075266f1653b (diff)
downloadaur-r-isee.tar.gz
[lilac] updated to 2.16.0-1
-rw-r--r--.SRCINFO9
-rw-r--r--PKGBUILD27
2 files changed, 20 insertions, 16 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 7380ebf012ce..a5d6c4b7a670 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,11 +1,10 @@
pkgbase = r-isee
pkgdesc = Interactive SummarizedExperiment Explorer
- pkgver = 2.14.0
+ pkgver = 2.16.0
pkgrel = 1
url = https://bioconductor.org/packages/iSEE
arch = any
license = MIT
- depends = r
depends = r-biocgenerics
depends = r-circlize
depends = r-colourpicker
@@ -14,6 +13,7 @@ pkgbase = r-isee
depends = r-ggplot2
depends = r-ggrepel
depends = r-igraph
+ depends = r-listviewer
depends = r-rintrojs
depends = r-s4vectors
depends = r-shiny
@@ -38,7 +38,8 @@ pkgbase = r-isee
optdepends = r-tenxpbmcdata
optdepends = r-testthat
optdepends = r-viridis
- source = https://bioconductor.org/packages/release/bioc/src/contrib/iSEE_2.14.0.tar.gz
- sha256sums = 44b2ecfea6f47e414b372c04e68be5384e873336c7caffb6b07a206905d71e4e
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/iSEE_2.16.0.tar.gz
+ md5sums = 098ec0eeda7e13bb6a60d1a28b0153f5
+ b2sums = 7853caf5370e4acdc1ceaca168e17cb9b8ce12b10ea4d92ed2fa1b66037252419eba4537877daa1124f02bbe596716c89a2d92a922abf7ad6c46256c9cdcb81e
pkgname = r-isee
diff --git a/PKGBUILD b/PKGBUILD
index 599fbeaa5f8b..ee46d0647fdc 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,16 +1,15 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=iSEE
-_pkgver=2.14.0
+_pkgver=2.16.0
pkgname=r-${_pkgname,,}
-pkgver=2.14.0
+pkgver=${_pkgver//-/.}
pkgrel=1
-pkgdesc='Interactive SummarizedExperiment Explorer'
-arch=('any')
-url="https://bioconductor.org/packages/${_pkgname}"
+pkgdesc="Interactive SummarizedExperiment Explorer"
+arch=(any)
+url="https://bioconductor.org/packages/$_pkgname"
license=('MIT')
depends=(
- r
r-biocgenerics
r-circlize
r-colourpicker
@@ -19,6 +18,7 @@ depends=(
r-ggplot2
r-ggrepel
r-igraph
+ r-listviewer
r-rintrojs
r-s4vectors
r-shiny
@@ -47,15 +47,18 @@ optdepends=(
r-viridis
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('44b2ecfea6f47e414b372c04e68be5384e873336c7caffb6b07a206905d71e4e')
+md5sums=('098ec0eeda7e13bb6a60d1a28b0153f5')
+b2sums=('7853caf5370e4acdc1ceaca168e17cb9b8ce12b10ea4d92ed2fa1b66037252419eba4537877daa1124f02bbe596716c89a2d92a922abf7ad6c46256c9cdcb81e')
build() {
- R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+ mkdir build
+ R CMD INSTALL -l build "$_pkgname"
}
package() {
- install -dm0755 "${pkgdir}/usr/lib/R/library"
- cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
- install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
+ install -d "$pkgdir/usr/lib/R/library"
+ cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+
+ install -d "$pkgdir/usr/share/licenses/$pkgname"
+ ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
-# vim:set ts=2 sw=2 et: