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authorBioArchLinuxBot2024-05-06 18:15:28 +0000
committerBioArchLinuxBot2024-05-06 18:15:28 +0000
commit03df773b11a833e91d93ca28b4a8e914b28a53f7 (patch)
tree54a8d2da1aaa27af28a7875b8f614f18d6b41ec4
parent1f5e3b1859f8b1ca28a52204f6ea2b9db4e9cded (diff)
downloadaur-r-moonlight2r.tar.gz
[lilac] updated to 1.2.0-1
-rw-r--r--.SRCINFO14
-rw-r--r--PKGBUILD12
2 files changed, 17 insertions, 9 deletions
diff --git a/.SRCINFO b/.SRCINFO
index c41a4693de7f..995ede9a353b 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,13 +1,14 @@
pkgbase = r-moonlight2r
pkgdesc = Identify oncogenes and tumor suppressor genes from omics data
- pkgver = 1.0.0
- pkgrel = 3
+ pkgver = 1.2.0
+ pkgrel = 1
url = https://bioconductor.org/packages/Moonlight2R
arch = any
license = GPL-3.0-only
checkdepends = r-testthat
depends = r-annotationhub
depends = r-biobase
+ depends = r-biocgenerics
depends = r-circlize
depends = r-clusterprofiler
depends = r-complexheatmap
@@ -15,10 +16,13 @@ pkgbase = r-moonlight2r
depends = r-dose
depends = r-dplyr
depends = r-easypubmed
+ depends = r-epimix
+ depends = r-experimenthub
depends = r-foreach
depends = r-fuzzyjoin
depends = r-genomicranges
depends = r-geoquery
+ depends = r-ggplot2
depends = r-gplots
depends = r-hiver
depends = r-magrittr
@@ -43,8 +47,8 @@ pkgbase = r-moonlight2r
optdepends = r-rmarkdown
optdepends = r-roxygen2
optdepends = r-testthat
- source = https://bioconductor.org/packages/release/bioc/src/contrib/Moonlight2R_1.0.0.tar.gz
- md5sums = 45af1bc580f9231cb2a83eae7517d3b8
- b2sums = 13fe521f228ce42b6693125e36e246bd09281441dc90224f891cb4e87866b94fb8ef40b6ea0ab2569bf6fa66efb16dfd55df517a3d2abde41abbdda881f4eb48
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/Moonlight2R_1.2.0.tar.gz
+ md5sums = b0dd4a005ee752f5d6113ebca14602d6
+ b2sums = 753e299bdc12b8becc409554c89d42419ddac99fc37285610e89b89902209fdb3052d0c8b3f21f1058dfd281ab6a826ee82198188cc536ff877e905bb392020d
pkgname = r-moonlight2r
diff --git a/PKGBUILD b/PKGBUILD
index e93e830da1ff..9302a76d4025 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,10 +1,10 @@
# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=Moonlight2R
-_pkgver=1.0.0
+_pkgver=1.2.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
-pkgrel=3
+pkgrel=1
pkgdesc="Identify oncogenes and tumor suppressor genes from omics data"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
@@ -12,6 +12,7 @@ license=('GPL-3.0-only')
depends=(
r-annotationhub
r-biobase
+ r-biocgenerics
r-circlize
r-clusterprofiler
r-complexheatmap
@@ -19,10 +20,13 @@ depends=(
r-dose
r-dplyr
r-easypubmed
+ r-epimix
+ r-experimenthub
r-foreach
r-fuzzyjoin
r-genomicranges
r-geoquery
+ r-ggplot2
r-gplots
r-hiver
r-magrittr
@@ -54,8 +58,8 @@ optdepends=(
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-md5sums=('45af1bc580f9231cb2a83eae7517d3b8')
-b2sums=('13fe521f228ce42b6693125e36e246bd09281441dc90224f891cb4e87866b94fb8ef40b6ea0ab2569bf6fa66efb16dfd55df517a3d2abde41abbdda881f4eb48')
+md5sums=('b0dd4a005ee752f5d6113ebca14602d6')
+b2sums=('753e299bdc12b8becc409554c89d42419ddac99fc37285610e89b89902209fdb3052d0c8b3f21f1058dfd281ab6a826ee82198188cc536ff877e905bb392020d')
build() {
mkdir build