Moved on to bugfix version v2.1.9b

2 files changed, 71 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..95a418c045f2
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,22 @@
+pkgbase = viennarna
+	pkgdesc = RNA Secondary Structure Prediction and Comparison
+	pkgver = 2.1.9
+	pkgrel = 1
+	url = http://www.tbi.univie.ac.at/RNA
+	arch = x86_64
+	arch = i686
+	license = Custom
+	depends = perl
+	optdepends = python2: python2 interface to the RNAlib
+	optdepends = ruby: ruby interface to the RNAlib
+	optdepends = gri: create 2D plots of secondary structure landscape with RNA2Dfold
+	provides = Kinfold=1.3
+	provides = RNAforester=1.5
+	provides = viennarna2=2.1.9
+	conflicts = viennarna
+	options = staticlibs
+	source = http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.9b.tar.gz
+	md5sums = 24f3a56a4cea90672978c2e6580d5c71
+
+pkgname = viennarna
+
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..cdc726ded2e9
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,49 @@
+# Maintainer: Ronny Lorenz <ronny at tbi dot univie dot ac dot at>
+
+pkgname=viennarna
+pkgver=2.1.9
+pkgrel=1
+pkgdesc="RNA Secondary Structure Prediction and Comparison"
+arch=('x86_64' 'i686')
+license=('Custom')
+url="http://www.tbi.univie.ac.at/RNA"
+depends=('perl')
+optdepends=('python2: python2 interface to the RNAlib'
+            'ruby: ruby interface to the RNAlib'
+            'gri: create 2D plots of secondary structure landscape with RNA2Dfold')
+conflicts=('viennarna')
+makedepends=()
+provides=('Kinfold=1.3' 'RNAforester=1.5' "viennarna2=${pkgver}")
+source=(http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-${pkgver}b.tar.gz)
+
+options=('staticlibs')
+md5sums=('24f3a56a4cea90672978c2e6580d5c71')
+
+build() {
+  cd "${srcdir}/ViennaRNA-${pkgver}b"
+  ./configure --with-cluster --prefix=/usr || return 1
+  make || return 1
+}
+
+check() {
+  cd "$srcdir/ViennaRNA-${pkgver}b"
+  make check
+}
+
+package() {
+  cd "${srcdir}/ViennaRNA-${pkgver}b"
+  make DESTDIR="${pkgdir}" install || return 1
+
+  install -Dm644 COPYING "$pkgdir/usr/share/licenses/$pkgname/LICENSE"
+
+  # cleanup after dirty install ...
+  for perlscript in "$pkgdir"/usr/share/ViennaRNA/bin/*.pl ; do
+    mv "$perlscript" "$pkgdir/usr/bin/$(basename "$perlscript" .pl)"
+  done
+  mv "$pkgdir"/usr/share/ViennaRNA/bin/* "$pkgdir"/usr/bin
+  rmdir "$pkgdir/usr/share/ViennaRNA/bin"
+  rm -rf "$pkgdir/usr/lib/perl5/core_perl"
+
+  # no need for that file it is outdated anyway
+  rm $pkgdir/usr/share/info/dir
+}