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authorMichael Schubert2024-04-19 11:54:26 +0200
committerMichael Schubert2024-04-19 11:54:26 +0200
commit3e02bf61a51452cc250ba11dc752ba1327229050 (patch)
treec653321f4b6c45683c2ab52e2512f4759254a69d
parent6564a4c0f9c7db09001705d4b265613eaaf68ba3 (diff)
downloadaur-3e02bf61a51452cc250ba11dc752ba1327229050.tar.gz
version bump 8.10.8
-rw-r--r--.SRCINFO35
-rw-r--r--PKGBUILD28
2 files changed, 35 insertions, 28 deletions
diff --git a/.SRCINFO b/.SRCINFO
index f3b94e807f06..c628fe0c2c99 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = snakemake
pkgdesc = Python-based language and execution environment for GNU Make-like workflows
- pkgver = 8.5.3
+ pkgver = 8.10.8
pkgrel = 1
url = https://snakemake.readthedocs.io
arch = any
@@ -17,28 +17,35 @@ pkgbase = snakemake
depends = python-docutils
depends = python-gitpython
depends = python-humanfriendly
- depends = python-jinja
+ depends = python-jinja>=3.0
depends = python-jsonschema
depends = jupyter-nbformat
depends = python-packaging
depends = python-psutil
- depends = python-pulp>=2.0
+ depends = python-pulp>=2.3.1
+ depends = python-pulp<2.9
depends = python-yaml
- depends = python-requests
+ depends = python-requests>=2.8.1
+ depends = python-requests<3.0
depends = python-reretry
depends = python-smart_open>=3.0
- depends = python-snakemake-interface-executor-plugins
- depends = python-snakemake-interface-common
- depends = python-snakemake-interface-storage-plugins
- depends = python-snakemake-interface-report-plugins
+ depends = python-smart_open<8.0
+ depends = python-snakemake-interface-executor-plugins>=9.1.0
+ depends = python-snakemake-interface-common>=1.17.0
+ depends = python-snakemake-interface-storage-plugins>=3.1.0
+ depends = python-snakemake-interface-report-plugins>=1.0.0
depends = python-stopit
depends = python-tabulate
depends = python-throttler
- depends = python-toposort
+ depends = python-toposort>=1.10
+ depends = python-toposort<2.0
depends = python-wrapt
- depends = python-yte
- depends = python-dpath
- depends = python-conda-inject
+ depends = python-yte>=1.5.1
+ depends = python-yte<2.0
+ depends = python-dpath>=2.1.6
+ depends = python-dpath<3.0.0
+ depends = python-conda-inject>=1.3.1
+ depends = python-conda-inject<2.0
optdepends = python-pygments: For report generation
optdepends = python-biopython: For GenBank/NCBI Entrez support
optdepends = python-easywebdav: For WebDAV support
@@ -49,7 +56,7 @@ pkgbase = snakemake
optdepends = python-ftputil: For FTP support
optdepends = python-xrootd: For XRootD support
optdepends = slacker: For messaging
- source = https://files.pythonhosted.org/packages/source/s/snakemake/snakemake-8.5.3.tar.gz
- sha256sums = 6fc39107b395760caf3893106d67859fc70d7de2a8892ddcbcd33611a50abeb1
+ source = https://files.pythonhosted.org/packages/source/s/snakemake/snakemake-8.10.8.tar.gz
+ sha256sums = 75711faa668324f9e6c44a860f2f9645be358763a97ee411bb32f7a8f6dca6b7
pkgname = snakemake
diff --git a/PKGBUILD b/PKGBUILD
index 5bc13e05cbba..21ded1c25939 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -3,7 +3,7 @@
# Contributor: Kyle Meyer <kyle@kyleam.com>
pkgname=snakemake
-pkgver=8.5.3
+pkgver=8.10.8
pkgrel=1
pkgdesc='Python-based language and execution environment for GNU Make-like workflows'
arch=(any)
@@ -17,28 +17,28 @@ depends=(
python-docutils
python-gitpython
python-humanfriendly
- python-jinja
+ 'python-jinja>=3.0' #'python-jinja<4.0'
python-jsonschema
jupyter-nbformat
python-packaging
python-psutil
- 'python-pulp>=2.0'
+ 'python-pulp>=2.3.1' 'python-pulp<2.9'
python-yaml
- python-requests
+ 'python-requests>=2.8.1' 'python-requests<3.0'
python-reretry
- 'python-smart_open>=3.0'
- python-snakemake-interface-executor-plugins
- python-snakemake-interface-common
- python-snakemake-interface-storage-plugins
- python-snakemake-interface-report-plugins
+ 'python-smart_open>=3.0' 'python-smart_open<8.0'
+ 'python-snakemake-interface-executor-plugins>=9.1.0'
+ 'python-snakemake-interface-common>=1.17.0'
+ 'python-snakemake-interface-storage-plugins>=3.1.0'
+ 'python-snakemake-interface-report-plugins>=1.0.0'
python-stopit
python-tabulate
python-throttler
- python-toposort
+ 'python-toposort>=1.10' 'python-toposort<2.0'
python-wrapt
- python-yte
- python-dpath
- python-conda-inject
+ 'python-yte>=1.5.1' 'python-yte<2.0'
+ 'python-dpath>=2.1.6' 'python-dpath<3.0.0'
+ 'python-conda-inject>=1.3.1' 'python-conda-inject<2.0'
)
makedepends=(python-setuptools python-build python-installer python-wheel)
optdepends=(
@@ -55,7 +55,7 @@ optdepends=(
)
license=(MIT)
source=("https://files.pythonhosted.org/packages/source/${pkgname::1}/$pkgname/$pkgname-$pkgver.tar.gz")
-sha256sums=('6fc39107b395760caf3893106d67859fc70d7de2a8892ddcbcd33611a50abeb1')
+sha256sums=('75711faa668324f9e6c44a860f2f9645be358763a97ee411bb32f7a8f6dca6b7')
build() {
cd "$srcdir/$pkgname-$pkgver"