Initial import

1 files changed, 28 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..aec7a2687e2b
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,28 @@
+# Maintainer: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com>
+
+pkgname=cmfinder
+pkgver=0.2
+pkgrel=2
+pkgdesc='A Covariance Model Based RNA Motif Finding Algorithm'
+arch=('i686' 'x86_64')
+url="http://bio.cs.washington.edu/yzizhen/CMfinder/"
+license=('GPL2')
+depends=('perl')
+source=("http://bio.cs.washington.edu/yzizhen/CMfinder/CMfinder_$pkgver.tgz")
+md5sums=('f4ff2c87b9cb29dc79e56ac30c9c30a5')
+
+build() {
+  cd "$srcdir/CMfinder_$pkgver"
+
+  make
+}
+
+package() {
+  cd "$srcdir/CMfinder_$pkgver"
+
+  install -d "$pkgdir/usr/bin"
+
+  for file in bin/* ; do
+    install -Dm755 "$file" "$pkgdir/usr/bin/$(basename "$file")"
+  done
+}