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authorRonny Lorenz2015-09-19 10:36:50 +0200
committerRonny Lorenz2015-09-19 10:36:50 +0200
commit6ef00254c1d3131535cee7d1a8dac316d49d1329 (patch)
treed46a10c6de226a8eea346212544c76cfb5aeaf0c /arch-readseq.readme
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+The readseq jar file is located at /usr/share/java/readseq/readseq.jar
+
+Normally readseq is used by typing a command such as:
+java -cp /usr/share/java/readseq/readseq.jar run myfile -f 12 -o outfile
+
+For the arch installation, a script has been placed at /usr/bin/readseq that passes command line args to the readseq jar file.
+So, to run the java command given above, you just need to type:
+readseq run myfile -f 12 -o outfile
+
+If you run /usr/bin/readseq without command line arguments, readseq will open as a gui application.
+
+