diff options
| -rw-r--r-- | .SRCINFO | 15 | ||||
| -rw-r--r-- | PKGBUILD | 31 |
2 files changed, 46 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..45642dd2d07e --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,15 @@ +pkgbase = metabat + pkgdesc = An Efficient Tool for Accurately Reconstructing Single Genomes from Complex Microbial Communities. + pkgver = 0.32.4 + pkgrel = 1 + url = https://bitbucket.org/berkeleylab/metabat + arch = i686 + arch = x86_64 + license = custom + depends = boost>=1.55 + options = !emptydirs + source = https://bitbucket.org/berkeleylab/metabat/downloads/metabat-static-binary-linux-x64_v0.32.4.tar.gz + md5sums = 66d61662ed0fd9a289210e9fb04ed745 + +pkgname = metabat + diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..5dcb21e1d525 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,31 @@ +# Maintainer: Fabio Zanini <fabio _DOT zanini AT_ fastmail DOT_ fm> +pkgname=metabat +pkgver=0.32.4 +pkgrel=1 +pkgdesc='An Efficient Tool for Accurately Reconstructing Single Genomes from Complex Microbial Communities.' +arch=('i686' 'x86_64') +url="https://bitbucket.org/berkeleylab/metabat" +license=('custom') +depends=('boost>=1.55') +#makedeps=('gcc>=4.9' 'python2' 'scons' 'zlib' 'binutils' 'boost>=1.55') +source=("https://bitbucket.org/berkeleylab/metabat/downloads/metabat-static-binary-linux-x64_v${pkgver}.tar.gz") +md5sums=('66d61662ed0fd9a289210e9fb04ed745') +options=('!emptydirs') + +package() { + cd "${srcdir}/${pkgname}" + + # Precompiled binaries + install -d "${pkgdir}"/usr/bin + install -m755 aggregateBinDepths.pl "${pkgdir}"/usr/bin/ + install -m755 aggregateContigOverlapsByBin.pl "${pkgdir}"/usr/bin/ + install -m755 contigOverlaps "${pkgdir}"/usr/bin/ + install -m755 jgi_summarize_bam_contig_depths "${pkgdir}"/usr/bin/ + install -m755 metabat "${pkgdir}"/usr/bin/ + install -m755 runMetaBat.sh "${pkgdir}"/usr/bin/ + + # License + install -d "${pkgdir}"/usr/share/licenses/${pkgname} + install -m644 license.txt "${pkgdir}"/usr/share/licenses/${pkgname}/LICENSE + +} |