diff options
-rw-r--r-- | .SRCINFO | 13 | ||||
-rw-r--r-- | PKGBUILD | 48 |
2 files changed, 61 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..45bd0e178ae2 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,13 @@ +pkgbase = python-fastaq-git + pkgdesc = Manipulate FASTA and FASTQ files. + pkgver = v1.7.0.r0.g360153c + pkgrel = 2 + url = https://github.com/sanger-pathogens/Fastaq + arch = any + license = GPL + makedepends = git + depends = python + provides = python-fastaq + +pkgname = python-fastaq-git + diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..d0cca9a9bde6 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,48 @@ +# Maintainer: Fabio Zanini <fabio.zanini@tuebingen.mpg.de> +pkgname=python-fastaq-git +pkgver=v1.7.0.r0.g360153c +pkgrel=2 +pkgdesc="Manipulate FASTA and FASTQ files." +arch=('any') +url="https://github.com/sanger-pathogens/Fastaq" +license=('GPL') +depends=('python') +makedepends=('git') +provides=('python-fastaq') +source=() +md5sums=() #generate with 'makepkg -g' + +_gitroot="https://github.com/sanger-pathogens/Fastaq.git" +_gitname="Fastaq" + +pkgver() { + cd "$srcdir/$_gitname" + git describe --tags --long | sed -r 's/([^-]*-g)/r\1/;s/-/./g' +} + +build() { + cd "$srcdir" + msg "Connecting to GIT server...." + + if [[ -d "$_gitname" ]]; then + cd "$_gitname" && git pull origin + msg "The local files are updated." + else + git clone "$_gitroot" "$_gitname" + fi + + msg "GIT checkout done or server timeout" + msg "Starting build..." + + rm -rf "$srcdir/$_gitname-build" + git clone "$srcdir/$_gitname" "$srcdir/$_gitname-build" + cd "$srcdir/$_gitname-build" + +} + +package() { + cd "$srcdir/$_gitname-build" + python setup.py install --root="$pkgdir/" --optimize=1 +} + +# vim:set ts=2 sw=2 et: |