diff options
| -rw-r--r-- | .SRCINFO | 11 | ||||
| -rw-r--r-- | PKGBUILD | 25 |
2 files changed, 19 insertions, 17 deletions
@@ -1,11 +1,10 @@ pkgbase = r-dominoeffect pkgdesc = Identification and Annotation of Protein Hotspot Residues - pkgver = 1.22.0 + pkgver = 1.24.0 pkgrel = 1 url = https://bioconductor.org/packages/DominoEffect arch = any - license = GPL - depends = r + license = GPL-3.0-or-later depends = r-annotationdbi depends = r-biomart depends = r-biostrings @@ -13,12 +12,14 @@ pkgbase = r-dominoeffect depends = r-genomeinfodb depends = r-genomicranges depends = r-iranges + depends = r-pwalign depends = r-summarizedexperiment depends = r-variantannotation optdepends = r-knitr optdepends = r-rmarkdown optdepends = r-testthat - source = https://bioconductor.org/packages/release/bioc/src/contrib/DominoEffect_1.22.0.tar.gz - sha256sums = f06fecfec8481f8eb6a049e4f28a23a49e957c362ecc55ac1166de8007cb4701 + source = https://bioconductor.org/packages/release/bioc/src/contrib/DominoEffect_1.24.0.tar.gz + md5sums = 75738ae6c59cfed0643a3bb2da6cd8cc + b2sums = 12a601b4463ddaf4ab6e95eda0a274a5cdd8af2f0749011dc7455c72476e4517c7b6b59c7b96e9c182451fa1f1bc6e85a6b7bbf0978e85fa633aa942ff2d17e1 pkgname = r-dominoeffect @@ -1,16 +1,15 @@ # Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> _pkgname=DominoEffect -_pkgver=1.22.0 +_pkgver=1.24.0 pkgname=r-${_pkgname,,} -pkgver=1.22.0 +pkgver=${_pkgver//-/.} pkgrel=1 -pkgdesc='Identification and Annotation of Protein Hotspot Residues' -arch=('any') -url="https://bioconductor.org/packages/${_pkgname}" -license=('GPL') +pkgdesc="Identification and Annotation of Protein Hotspot Residues" +arch=(any) +url="https://bioconductor.org/packages/$_pkgname" +license=('GPL-3.0-or-later') depends=( - r r-annotationdbi r-biomart r-biostrings @@ -18,6 +17,7 @@ depends=( r-genomeinfodb r-genomicranges r-iranges + r-pwalign r-summarizedexperiment r-variantannotation ) @@ -27,14 +27,15 @@ optdepends=( r-testthat ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -sha256sums=('f06fecfec8481f8eb6a049e4f28a23a49e957c362ecc55ac1166de8007cb4701') +md5sums=('75738ae6c59cfed0643a3bb2da6cd8cc') +b2sums=('12a601b4463ddaf4ab6e95eda0a274a5cdd8af2f0749011dc7455c72476e4517c7b6b59c7b96e9c182451fa1f1bc6e85a6b7bbf0978e85fa633aa942ff2d17e1') build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir build + R CMD INSTALL -l build "$_pkgname" } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" } -# vim:set ts=2 sw=2 et: |