summarylogtreecommitdiffstats
diff options
context:
space:
mode:
-rw-r--r--.SRCINFO12
-rw-r--r--PKGBUILD10
2 files changed, 13 insertions, 9 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 8d68c4989297..543f32d079b7 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,12 +1,13 @@
pkgbase = r-rnaseqcovarimpute
pkgdesc = Impute Covariate Data in RNA Sequencing Studies
- pkgver = 1.0.2
- pkgrel = 3
+ pkgver = 1.2.0
+ pkgrel = 1
url = https://bioconductor.org/packages/RNAseqCovarImpute
arch = any
license = GPL-3.0-only
checkdepends = r-testthat
depends = r-biobase
+ depends = r-biocgenerics
depends = r-biocparallel
depends = r-dplyr
depends = r-edger
@@ -17,12 +18,13 @@ pkgbase = r-rnaseqcovarimpute
depends = r-rlang
optdepends = r-biocstyle
optdepends = r-knitr
+ optdepends = r-pcatools
optdepends = r-rmarkdown
optdepends = r-stringr
optdepends = r-testthat
optdepends = r-tidyr
- source = https://bioconductor.org/packages/release/bioc/src/contrib/RNAseqCovarImpute_1.0.2.tar.gz
- md5sums = 17d14273ae359562d3f0cbf1c45b10a7
- b2sums = 48f75a62b283ba85cc581266360abebb252ac32a9e3e8193ed11b5c68deb9df4d2ffd41903cbfa41855ab99a77a2a61b1837aa21cec74ed940fd298d5b915367
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/RNAseqCovarImpute_1.2.0.tar.gz
+ md5sums = 0ec9872567c7b1063c7d9fb1f20a3517
+ b2sums = c2a263fd3922a217da2be63f8d43b4cea88792014abcaa97a2f89279898e09581fe706e10375315e847a557c2a1f3b21b896025db04a49b41e135a19e01fc962
pkgname = r-rnaseqcovarimpute
diff --git a/PKGBUILD b/PKGBUILD
index 02a8be0f02ae..f2ebec076cec 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,16 +1,17 @@
# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=RNAseqCovarImpute
-_pkgver=1.0.2
+_pkgver=1.2.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
-pkgrel=3
+pkgrel=1
pkgdesc="Impute Covariate Data in RNA Sequencing Studies"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
r-biobase
+ r-biocgenerics
r-biocparallel
r-dplyr
r-edger
@@ -26,14 +27,15 @@ checkdepends=(
optdepends=(
r-biocstyle
r-knitr
+ r-pcatools
r-rmarkdown
r-stringr
r-testthat
r-tidyr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-md5sums=('17d14273ae359562d3f0cbf1c45b10a7')
-b2sums=('48f75a62b283ba85cc581266360abebb252ac32a9e3e8193ed11b5c68deb9df4d2ffd41903cbfa41855ab99a77a2a61b1837aa21cec74ed940fd298d5b915367')
+md5sums=('0ec9872567c7b1063c7d9fb1f20a3517')
+b2sums=('c2a263fd3922a217da2be63f8d43b4cea88792014abcaa97a2f89279898e09581fe706e10375315e847a557c2a1f3b21b896025db04a49b41e135a19e01fc962')
build() {
mkdir build