summarylogtreecommitdiffstats
diff options
context:
space:
mode:
-rw-r--r--.SRCINFO11
-rw-r--r--PKGBUILD9
2 files changed, 7 insertions, 13 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 7fd9583a0b3f..294abcd0f6c1 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = r-spotlight
pkgdesc = `SPOTlight`: Spatial Transcriptomics Deconvolution
- pkgver = 1.6.7
+ pkgver = 1.8.0
pkgrel = 1
url = https://bioconductor.org/packages/SPOTlight
arch = any
@@ -12,7 +12,6 @@ pkgbase = r-spotlight
checkdepends = r-jpeg
checkdepends = r-png
checkdepends = r-scatterpie
- checkdepends = r-seuratobject
checkdepends = r-spatialexperiment
checkdepends = r-tenxvisiumdata
checkdepends = r-testthat
@@ -37,15 +36,13 @@ pkgbase = r-spotlight
optdepends = r-scater
optdepends = r-scatterpie
optdepends = r-scran
- optdepends = r-seurat
- optdepends = r-seuratobject
optdepends = r-spatialexperiment
optdepends = r-summarizedexperiment
optdepends = r-tabulamurissenisdata
optdepends = r-tenxvisiumdata
optdepends = r-testthat
- source = https://bioconductor.org/packages/release/bioc/src/contrib/SPOTlight_1.6.7.tar.gz
- md5sums = 0362e0be411e3ed3ce5bf9b928439e10
- b2sums = 1ea3f06da6af3f44a60c4542032540f72c65304cbce72b1f8132394338ff3d54901989e9bb6027a71a79be292bdcb5252d2dea3ea9a7fa9bddafc8d654828497
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/SPOTlight_1.8.0.tar.gz
+ md5sums = 27478472e9aca4692dff302dcb4efe07
+ b2sums = 2776d700ebff3f3035d64a18797402ab5455c0b2c1e3640254c7ac3db6b337f454cbc38af093e831c1e7aa8e4e0fc7e2302348915a2c2263c5c919088e6fb07f
pkgname = r-spotlight
diff --git a/PKGBUILD b/PKGBUILD
index 65dfc3611e3a..def01a1ee46a 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,7 +1,7 @@
# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=SPOTlight
-_pkgver=1.6.7
+_pkgver=1.8.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
@@ -25,7 +25,6 @@ checkdepends=(
r-jpeg
r-png
r-scatterpie
- r-seuratobject
r-spatialexperiment
r-tenxvisiumdata
r-testthat
@@ -46,8 +45,6 @@ optdepends=(
r-scater
r-scatterpie
r-scran
- r-seurat
- r-seuratobject
r-spatialexperiment
r-summarizedexperiment
r-tabulamurissenisdata
@@ -55,8 +52,8 @@ optdepends=(
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-md5sums=('0362e0be411e3ed3ce5bf9b928439e10')
-b2sums=('1ea3f06da6af3f44a60c4542032540f72c65304cbce72b1f8132394338ff3d54901989e9bb6027a71a79be292bdcb5252d2dea3ea9a7fa9bddafc8d654828497')
+md5sums=('27478472e9aca4692dff302dcb4efe07')
+b2sums=('2776d700ebff3f3035d64a18797402ab5455c0b2c1e3640254c7ac3db6b337f454cbc38af093e831c1e7aa8e4e0fc7e2302348915a2c2263c5c919088e6fb07f')
build() {
mkdir build