diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 65 |
1 files changed, 33 insertions, 32 deletions
@@ -1,39 +1,40 @@ -# Maintainer: Uzerus < szymonscholz at gmail.com > -# Contributor: Justin Dray <justin@dray.be> -# Contributor: Augusto F. Hack <hack.augusto@gmail.com> +# Maintainer: Bipin Kumar <kbipinkumar@pm.me> +# shellcheck disable=2034 +# shellcheck disable=2148 pkgname=diamond -pkgver=4.0.515 -pkgrel=3 -pkgdesc="Daemon that collects system metrics and publishes -them to graphite and others" -arch=('any') -url="https://github.com/python-diamond/Diamond" -license=('mit') -depends=('python2' 'python') -makedepends=('') -optdepends=('python2-psycopg2: Postgresql collector' - 'python2-pysensors: LMSensors collector' - 'libvirt-python: LibvirtKVM collector' - 'python2-yaml: PuppetAgent collector') -backup=(etc/diamond/diamond.conf) -source=("https://pypi.python.org/packages/0c/b6/4c58a8a1111c138fbed9e65dd918be706af8abd07bb5e8fe3ddfb453d899/${pkgname}-${pkgver}.tar.gz" - "https://archive.org/download/${pkgname}_201801/${pkgname}.service") -md5sums=('9ef6c5203e098da10aa0d90b344a49da' - '4294f34a8a4644c28788b997dcb4ba22') +pkgver=2.1.9 +pkgrel=1 +pkgdesc="High performance sequence aligner for protein and translated DNA searches with big sequence data. https://doi.org/10.1038/s41592-021-01101-x" +arch=('x86_64') +url="https://github.com/bbuchfink/diamond" +license=('GPL3') +depends=('gcc-libs' 'zlib' 'zstd' 'blast+' 'glibc') +makedepends=('cmake') +source=("$pkgname-$pkgver.tar.gz::https://github.com/bbuchfink/diamond/archive/v$pkgver.tar.gz") +sha256sums=('4cde9df78c63e8aef9df1e3265cd06a93ce1b047d6dba513a1437719b70e9d88') +build() { + cd $pkgname-$pkgver + cmake -B build \ + -DCMAKE_INSTALL_PREFIX=/usr \ + -DCMAKE_BUILD_TYPE=Release \ + -DWITH_ZSTD=ON \ + -DBLAST_INCLUDE_DIR=/usr/include/ncbi-tools++ \ + -DBLAST_LIBRARY_DIR=/usr/lib/ \ + -DZSTD_LIBRARY=/usr/lib/libzstd.so \ + -DZLIB_INCLUDE_DIR=/usr/include \ + -Wno-dev -package() { - cd "$srcdir/diamond-${pkgver}" - - install -D -m644 "$srcdir/diamond.service" "$pkgdir/usr/lib/systemd/system/diamond.service" - python2 setup.py install --root="$pkgdir/" --optimize=1 - rm "$pkgdir/etc/diamond/diamond.conf.example.windows" - rm -rf "$pkgdir/etc/diamond/collectors" - rm -rf "$pkgdir/etc/diamond/handlers" - rm -rf "$pkgdir/usr/share/diamond/user_scripts" - mv "$pkgdir/etc/diamond/diamond.conf.example" "$pkgdir/etc/diamond/diamond.conf" + cmake --build build +} - install -Dm644 LICENSE "$pkgdir/usr/share/licenses/${pkgname}/LICENSE" +check() { + cd $pkgname-$pkgver + ctest --test-dir build --output-on-failure } +package() { + cd $pkgname-$pkgver + DESTDIR="$pkgdir" cmake --install build +} |