diff options
Diffstat (limited to 'PKGBUILD')
| -rwxr-xr-x | PKGBUILD | 28 |
1 files changed, 18 insertions, 10 deletions
@@ -2,7 +2,7 @@ # Contributor: fishburn <frankthefishburn@gmail.com> pkgname=fsl -pkgver=6.0.3 +pkgver=6.0.4 pkgrel=1 pkgdesc="A comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data" arch=("x86_64") @@ -20,18 +20,22 @@ source=("https://www.fmrib.ox.ac.uk/fsldownloads/fsl-${pkgver}-sources.tar.gz" "001-use_distribution_environment.patch" "002-fix_meldata_usage_of_ifstream.patch" "003-fix_fsl_exec_empty_errorCode.patch" - "004-fix_missing_LIB_PROB.patch") + "004-fix_missing_LIB_PROB.patch" + "005-fix_cuda_thrust_include.patch" + "006-compile_ptx2_without_std-c++11.patch") -sha256sums=('9eec9b4f5d67fa727b50ad6d4c8265b82403dd6163c4747797ef910f826a2636' - '719d9e12e165c1a40d411dae2aca53e8d9033192c91853a6c60e5a55c0c022fb' - 'e73d3b7289981c95581d9378c2a39694bc0fcdf7170c5defc864a47871e98df1' - 'c61f185fbe7e297c4518e96377aa5ff4852f90eda0dbb9ae8edc5e24735e14ad' - '7a1039cdc38b4d728f14efce3b0fda0cadc7bfcd3432556c3f3113985bf2720a' - 'b6f61a6d5672b6684f19150f6e21ded1bd04ec6415dcf07a32291e4002bfa5d8' - '8c85234f03d3cd226f84fd1aa446e46a8f00c2c6ae3cc7fefedc1e48ffc61daa' +sha256sums=('58b88f38e080b05d70724d57342f58e1baf56e2bd3b98506a72b4446cad5033e' + '411daed14287d6ba536cb531450941ab1f570309cd561de4e2a4b0ec43a7e9f7' + 'c7f93adcf037a73182ae42ae6a59d3eb04a492888b6c2a6b528f9cd16539b2b2' + '8aac3a2ea61bb4c38eb363262ab7f89e55c49a5feb9912fd2ff71f2439f11fc9' + 'b3280bafc86d04dfa8835ef21f50469f2645bf09c36edcdd3f04349ce2c74225' + '8e343b0ff93477280fd9a980822ddc9980afa7201dea51c886376c189c234c99' + '906ac7de8068e5a5487b083844b50b6afd7562866088a4175fd88030182affdd' '13d4cf35343e7a73bc2534c94b1b0d4db41c338d374e6982091e4cf7a421d420' '64b4ccefa63a3cf920b185dd52e94b918c24f2cedaebcec8efb767bd80a6418a' - 'adea0372f42026e72e385f1bec19ecc8cffa46de1f617271f14c9345c6b83c04') + 'adea0372f42026e72e385f1bec19ecc8cffa46de1f617271f14c9345c6b83c04' + '9471addfc2f880350eedadcb99cb8b350abf42be1c0652ccddf49e34e5e48734' + 'ab68cb802243ce715eff0d1136cfa29fa34a3e09934e5e20e02a092d69028df1') prepare() { cd "${srcdir}" @@ -49,6 +53,10 @@ prepare() { patch -Np1 -i "${srcdir}"/003-fix_fsl_exec_empty_errorCode.patch # I'm not sure why -L${LIB_PROB} is missing in some Makefiles patch -Np1 -i "${srcdir}"/004-fix_missing_LIB_PROB.patch + # Adapted from Caspar van Leeuwen's patch: https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=FSL;2b74023.2006 + patch -Np1 -i "${srcdir}"/005-fix_cuda_thrust_include.patch + # ptx2 does not compile when assuming C++11 standard + patch -Np1 -i "${srcdir}"/006-compile_ptx2_without_std-c++11.patch # Insert makepkg build flags into configuration sed -i '0,/${AccumulatedIncFlags}/{s^${AccumulatedIncFlags}^& '"${CFLAGS}"'^}' "${srcdir}/fsl/config/common/vars.mk" |