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-rw-r--r--PKGBUILD11
1 files changed, 7 insertions, 4 deletions
diff --git a/PKGBUILD b/PKGBUILD
index e5692d5400c9..0f3da2a6c132 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,7 +1,7 @@
# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=BSgenomeForge
-_pkgver=1.2.3
+_pkgver=1.4.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
@@ -12,9 +12,11 @@ license=('Artistic-2.0')
depends=(
r-biobase
r-biocgenerics
+ r-biocio
r-biostrings
r-bsgenome
r-genomeinfodb
+ r-genomicranges
r-iranges
r-rtracklayer
r-s4vectors
@@ -24,16 +26,17 @@ checkdepends=(
)
optdepends=(
r-biocstyle
+ r-bsgenome.celegans.ucsc.ce2
r-devtools
r-genomicfeatures
- r-genomicranges
r-knitr
r-rmarkdown
+ r-rsamtools
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-md5sums=('f6b0c95390692557860c977b1eba0f0c')
-b2sums=('4b0ba548243f7afb2a5bcb019032b13de5c12ae6d7306686ff2cdc760b61224e71fc8be88680218890078f50e9d911fc3502fa50b4ce074c6c76871d9e211d81')
+md5sums=('22dca3b3a7c2277c174c20cd5df0b698')
+b2sums=('a9e8236b6588462966ac068d57aadab8a5856208ccd2faa714298f622ac3c456bd972d85f9a37370dc051623866fb1a6a87747d7e6ecace2d768cf5c933e81a5')
build() {
mkdir build