diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 26 |
1 files changed, 14 insertions, 12 deletions
@@ -1,16 +1,15 @@ # Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> _pkgname=EpiTxDb -_pkgver=1.14.1 +_pkgver=1.16.0 pkgname=r-${_pkgname,,} -pkgver=1.14.1 +pkgver=${_pkgver//-/.} pkgrel=1 -pkgdesc='Storing and accessing epitranscriptomic information using the AnnotationDbi interface' -arch=('any') -url="https://bioconductor.org/packages/${_pkgname}" -license=('Artistic2.0') +pkgdesc="Storing and accessing epitranscriptomic information using the AnnotationDbi interface" +arch=(any) +url="https://bioconductor.org/packages/$_pkgname" +license=('Artistic-2.0') depends=( - r r-annotationdbi r-biocfilecache r-biocgenerics @@ -23,9 +22,11 @@ depends=( r-httr r-iranges r-modstrings + r-rex r-rsqlite r-s4vectors r-trnadbimport + r-txdbmaker r-xml2 ) optdepends=( @@ -43,14 +44,15 @@ optdepends=( r-txdb.hsapiens.ucsc.hg38.knowngene ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -sha256sums=('ad425f358f3cd7b31efb8c29069b204bd9b83d90cf13638dd92f704826c78762') +md5sums=('20e35a30fee32809fda75ba666f36a8c') +b2sums=('ba8bf305321b12954444d77c2f46b35b1bccfb6e5f7da515192c9dde0fcecee8b2f8055f6dc4b9dcec8ee29f4a9a4472b4a9d82867135c600832ca7e7fc66b5d') build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir build + R CMD INSTALL -l build "$_pkgname" } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" } -# vim:set ts=2 sw=2 et: |