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-rw-r--r--PKGBUILD35
1 files changed, 35 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD
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+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=MafDb.gnomADex.r2.1.hs37d5
+_pkgver=3.10.0
+pkgname=r-${_pkgname,,}
+pkgver=3.10.0
+pkgrel=3
+pkgdesc='Minor allele frequency data from gnomAD exomes release 2.1 for hs37d5'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+ r
+ r-bsgenome
+ r-genomeinfodb
+ r-genomicranges
+ r-genomicscores
+ r-iranges
+ r-s4vectors
+)
+optdepends=(
+ r-snplocs.hsapiens.dbsnp144.grch37
+)
+source=("https://bioconductor.org/packages/release/data/annotation/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('5e35f5979fe9875feda4ee4ee19a1b340ee7def953578d9fee4d461a2bb38278')
+
+build() {
+ R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+ install -dm0755 "${pkgdir}/usr/lib/R/library"
+ cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: