diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 70 |
1 files changed, 54 insertions, 16 deletions
@@ -1,30 +1,68 @@ +# Maintainer: peippo <christoph+aur@christophfink.com> # Contributor: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com # Contributor: Grey Christoforo <first name at last name dot net> _cranname=matrixStats -_cranver=0.55.0 +_cranver=1.3.0 pkgname=r-${_cranname,,} -pkgver=${_cranver//[:-]/.} -pkgrel=1 pkgdesc="Functions that Apply to Rows and Columns of Matrices (and to Vectors)" -arch=(i686 x86_64) url="https://cran.r-project.org/package=${_cranname}" -license=(Artistic-2.0) -depends=('r>=2.12.0') -makedepends=(gcc) -optdepends=(r-base64enc r-ggplot2 r-knitr r-microbenchmark r-r.devices r-r.rsp) +license=("Artistic2.0") +pkgver=${_cranver//[:-]/.} +pkgrel=1 + +arch=("i686" "x86_64") +depends=( + "r>=2.12.0" +) +optdepends=( + "r-base64enc" + "r-ggplot2" + "r-knitr" + "r-markdown" + "r-microbenchmark" + "r-r.devices" + "r-r.rsp" + "r-utils" +) + +# The unittests for `r-matrixstats` have multiple circular +# dependency chains. + +# As such, the tests can not be run on first build. +# While R packages from CRAN, generally, are well-tested +# before they are released, in some situations, you want to +# have thorough testing on your own end. + +# To run the tests, first build this package without `check()` +# (i.e., as-is) to bootstrap `r-matrixstats`. Then, on subsequent builds, +# (assumining you have a local repository that is accessible from +# the build chroot), uncomment the lines defining `checkdepends`, below, +# as well as the `check()` function further down + +# checkdepends=( +# "${optdepends[@]}" +# "qpdf" +# "r-rcmdcheck" +# ) + source=("https://cran.r-project.org/src/contrib/${_cranname}_${_cranver}.tar.gz") -md5sums=('860aa7af56ddb598268cbca7921e2d4c') +b2sums=("79aaa70c60d1965c979c7e482d1fefc504a61516a20f26497088b7e59efa8a95a51243e4c91b474f0334860dc5e48d324705b608e65ff9657a3aee6bc1dabcc3") build() { - cd "${srcdir}" - - R CMD INSTALL ${_cranname}_${_cranver}.tar.gz -l ${srcdir} + mkdir -p "${srcdir}/build/" + R CMD INSTALL ${_cranname}_${_cranver}.tar.gz -l "${srcdir}/build/" } -package() { - cd "${srcdir}" +# check() { +# export R_LIBS="build/" +# R CMD check --no-manual "${_cranname}" +# } - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_cranname}" "${pkgdir}/usr/lib/R/library" +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${srcdir}/build/${_cranname}" "${pkgdir}/usr/lib/R/library" + if [[ -f "${_cranname}/LICENSE" ]]; then + install -Dm0644 "${_cranname}/LICENSE" "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE" + fi } |