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-rw-r--r--PKGBUILD28
1 files changed, 16 insertions, 12 deletions
diff --git a/PKGBUILD b/PKGBUILD
index b145dcebe601..0f2a6bbdc7bb 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,16 +1,17 @@
# Maintainer: sukanka <su975853527@gmail.com>
_pkgname=MsExperiment
-_pkgver=1.4.0
+_pkgver=1.6.0
pkgname=r-${_pkgname,,}
-pkgver=${_pkgver//[:-]/.}
+pkgver=${_pkgver//-/.}
pkgrel=1
-pkgdesc='Infrastructure for Mass Spectrometry Experiments'
-arch=('any')
-url="https://bioconductor.org/packages/${_pkgname}"
-license=('Artistic2.0')
+pkgdesc="Infrastructure for Mass Spectrometry Experiments"
+arch=(any)
+url="https://bioconductor.org/packages/$_pkgname"
+license=('Artistic-2.0')
depends=(
- r
+ r-biocgenerics
+ r-dbi
r-iranges
r-protgenerics
r-qfeatures
@@ -21,22 +22,25 @@ depends=(
optdepends=(
r-biocstyle
r-knitr
+ r-msbackendsql
r-msdata
r-mzr
r-rmarkdown
r-roxygen2
r-rpx
+ r-rsqlite
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('cf79cbb2db2cd679285cdd5407a46bbf8f816804f736f375c5b20ff88189a01a')
+md5sums=('c95f1ab0bb76378e8994375e9a45b008')
+b2sums=('302f474448f7f758b37c2ff2e849fa9ad9be65bf99cb4008f5bb84f4edd9f45875c73d7a8fa4af309b4084ed75369c27bbab177cee98e1caefc4f44fbd106099')
build() {
- R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+ mkdir build
+ R CMD INSTALL -l build "$_pkgname"
}
package() {
- install -dm0755 "${pkgdir}/usr/lib/R/library"
- cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+ install -d "$pkgdir/usr/lib/R/library"
+ cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
-# vim:set ts=2 sw=2 et: