diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 30 |
1 files changed, 15 insertions, 15 deletions
@@ -1,17 +1,16 @@ -# system requirements: pandoc (>= 1.12.3) # Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> _pkgname=RCAS -_pkgver=1.28.2 +_pkgver=1.28.3 pkgname=r-${_pkgname,,} -pkgver=1.28.2 +pkgver=${_pkgver//-/.} pkgrel=1 -pkgdesc='RNA Centric Annotation System' -arch=('any') -url="https://bioconductor.org/packages/${_pkgname}" -license=('Artistic2.0') +pkgdesc="RNA Centric Annotation System" +arch=(any) +url="https://bioconductor.org/packages/$_pkgname" +license=('Artistic-2.0') depends=( - r + pandoc r-biocgenerics r-biostrings r-bsgenome @@ -24,7 +23,6 @@ depends=( r-genomicfeatures r-genomicranges r-ggplot2 - r-ggseqlogo r-gprofiler2 r-iranges r-knitr @@ -38,21 +36,23 @@ depends=( r-rsqlite r-rtracklayer r-s4vectors - pandoc + r-seqlogo ) optdepends=( + r-biocmanager r-covr r-testthat ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -sha256sums=('db629b5c513b5f50a34327b67cb722167a88961e8738f100271bbd31996e34a6') +md5sums=('ed2c97bacd70c083df386e7df14d0c11') +b2sums=('c6c3f45c9d79bc3d71c67c2349fa1a7b85bb23d3322bd1036c7d60f41e3b00c5f03cd696d2d3076452aed0c0dc419c8d9df0a5593b03f9482160f7f53e6d0beb') build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir build + R CMD INSTALL -l build "$_pkgname" } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" } -# vim:set ts=2 sw=2 et: |