diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 23 |
1 files changed, 15 insertions, 8 deletions
@@ -1,20 +1,26 @@ # Maintainer: Clint Valentine <valentine.clint@gmail.com> pkgname=vcf-validator -pkgver=0.6 -pkgrel=2 +pkgver=0.7 +pkgrel=1 pkgdesc="Validation suite for Variant Call Format (VCF) files" -arch=('i686' 'x86_64') -url=https://github.com/EBIvariation/vcf-validator +arch=('x86_64') +url=https://github.com/EBIvariation/"${pkgname}" license=('Apache') depends=('libpthread-stubs' 'libodb-sqlite' 'odb') makedepends=('cmake' 'boost') source=("${pkgname}"-"${pkgver}".tar.gz::https://github.com/EBIvariation/"${pkgname}"/archive/v"${pkgver}".tar.gz) -sha256sums=('9ae64caea3439feed1f24268d82610f90dac6578169e0d87f82caeb7c349dadc') +sha256sums=('da0cb126e2dad6f79a8ec503f02addf0b4e437f072e44a1cf832e64f0806d019') prepare() { mkdir -p build - sed -i '/include_directories (lib)/ a link_directories ("/usr/lib/odb/")' "${pkgname}-${pkgver}"/CMakeLists.txt + # Cmake cannot located `libodb-sqlite` and `odb` libraries so patch it in. + # Many thanks to the community for this small fix: + # https://bbs.archlinux.org/viewtopic.php?id=234124 + # + sed -i \ + '/include_directories (lib)/ a link_directories ("/usr/lib/odb/")' \ + "${pkgname}-${pkgver}"/CMakeLists.txt } build() { @@ -24,8 +30,9 @@ build() { } package() { - install -Dm755 build/bin/vcf_validator "${pkgdir}"/usr/bin/vcf_validator - install -Dm755 build/bin/vcf_debugulator "${pkgdir}"/usr/bin/vcf_debugulator + cd build + install -Dm755 bin/vcf_validator "${pkgdir}"/usr/bin/vcf_validator + install -Dm755 bin/vcf_debugulator "${pkgdir}"/usr/bin/vcf_debugulator cd "${srcdir}"/"${pkgname}"-"${pkgver}" install -Dm644 LICENSE "${pkgdir}"/usr/share/licenses/"${pkgname}"/LICENSE |