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pkgbase = centrifuge
pkgdesc = Rapid and memory-efficient tool for classification of metagenomic sequences
pkgver = 1.0.4.2
pkgrel = 1
url = https://ccb.jhu.edu/software/centrifuge/
arch = x86_64
license = GPL3
makedepends = git
makedepends = inetutils
makedepends = pandoc
depends = glibc
depends = gcc-libs
depends = python
depends = perl
depends = bash
depends = jellyfish
depends = hisat2
source = centrifuge-1.0.4.2.tar.gz::https://github.com/DaehwanKimLab/centrifuge/archive/refs/tags/v1.0.4.2.tar.gz
source = alphabet.cpp.patch
source = alphabet.h.patch
source = centrifuge-build.patch
source = centrifuge_evaluate_mason.py.patch
source = centrifuge_evaluate.py.patch
source = centrifuge-inspect.patch
source = centrifuge_simulate_reads.py.patch
source = Makefile.patch
sha256sums = db142790522a72971c7deda7d22e1f29fce54dbf23afc2e40def9f5a764f4c99
sha256sums = ae9334ddd0cb9b09811969c151350c4e5ee73452fe5d00f01fd7cf23d6573d78
sha256sums = f681bd2fd89429245ff092b689d53c7e119a5f1270a414b8629896fd5ced90f5
sha256sums = 12be02a7c3b63679703874b45b6491c81402bac7159859936fe4c78a47632ded
sha256sums = ee6e4c8d8b3d12c141bfeff1aa8c7afd027259d8aa0d1380f6854d4619d868ad
sha256sums = ad05064999c0da91866c82063e42ef60107142acc878fde0342bd629d26d3e68
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sha256sums = f4268c3aa84fc1e14281470251217c1a4a36317c6ad93fc772ea4a46218a3a67
sha256sums = e523ba32ad8163db09fd516a51756f726434dbbe2a2dd9697a5e6a6d606097c1
pkgname = centrifuge
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