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pkgbase = freebayes
pkgdesc = About Bayesian haplotype-based genetic polymorphism discovery and genotyping
pkgver = 1.3.9
pkgrel = 1
url = https://github.com/freebayes/freebayes
arch = x86_64
license = MIT
makedepends = ninja
makedepends = meson
makedepends = git
makedepends = cmake
makedepends = make
makedepends = vcftools
makedepends = samtools
makedepends = parallel
makedepends = bc
makedepends = perl
makedepends = patch
depends = tabixpp
depends = seqlib
depends = vcflib
source = freebayes-1.3.9.tar.gz::https://github.com/freebayes/freebayes/archive/refs/tags/v1.3.9.tar.gz
source = fastahack.zip::https://github.com/ekg/fastahack/archive/refs/tags/v1.0.0.tar.gz
source = multichoose.zip::https://github.com/vcflib/multichoose/archive/255192edd49cfe36557f7f4f0d2d6ee1c702ffbb.zip
source = smithwaterman.zip::https://github.com/ekg/smithwaterman/archive/2610e259611ae4cde8f03c72499d28f03f6d38a7.zip
source = meson.patch::https://github.com/freebayes/freebayes/pull/823.patch
sha256sums = 41ed3074c7648375286168a6708e02dac6788eaca4ca6039ff5a7ed91f257b53
sha256sums = cc1c04729b0c8ba3647cbb7e15e2b490ce701d73773f30f5892d68c36a1dceae
sha256sums = 799ce24cf3784090df39dd9552d515bda9c9e7d3f24e7712dd08565680b5c8ed
sha256sums = 0806976c46a5117c7b7a6d4e174e267f05bc652885ca72a82b91e5a87600d4f9
sha256sums = 910d79a9c3c1cb81936db3c34241334d2635abcd4b38f4dd080580c6cb921e9c
pkgname = freebayes
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