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pkgbase = r-cager
pkgdesc = Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining
pkgver = 2.10.0
pkgrel = 1
url = https://bioconductor.org/packages/CAGEr
arch = any
license = GPL
depends = r
depends = r-biocgenerics
depends = r-biocparallel
depends = r-bsgenome
depends = r-cagefightr
depends = r-data.table
depends = r-delayedarray
depends = r-delayedmatrixstats
depends = r-formula.tools
depends = r-genomeinfodb
depends = r-genomicalignments
depends = r-genomicranges
depends = r-ggplot2
depends = r-gtools
depends = r-iranges
depends = r-memoise
depends = r-multiassayexperiment
depends = r-plyr
depends = r-reshape2
depends = r-rsamtools
depends = r-rtracklayer
depends = r-s4vectors
depends = r-som
depends = r-stringdist
depends = r-stringi
depends = r-summarizedexperiment
depends = r-vegan
depends = r-vgam
optdepends = r-biocstyle
optdepends = r-bsgenome.drerio.ucsc.danrer7
optdepends = r-deseq2
optdepends = r-fantom3and4cage
optdepends = r-knitr
optdepends = r-rmarkdown
source = https://bioconductor.org/packages/release/bioc/src/contrib/CAGEr_2.10.0.tar.gz
sha256sums = e4668be44971a95d4845de2bd29bea05b1d544e529577969650cede00b3dbdaa
pkgname = r-cager
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