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pkgbase = r-chippeakanno
pkgdesc = Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments, or any experiments that result in large number of genomic interval data
pkgver = 3.42.0
pkgrel = 1
url = https://bioconductor.org/packages/ChIPpeakAnno
arch = any
license = GPL-2.0-or-later
depends = r-annotationdbi
depends = r-biocgenerics
depends = r-biomart
depends = r-biostrings
depends = r-data.table
depends = r-dbi
depends = r-dplyr
depends = r-ensembldb
depends = r-genomeinfodb
depends = r-genomicalignments
depends = r-genomicfeatures
depends = r-genomicranges
depends = r-ggplot2
depends = r-graph
depends = r-interactionset
depends = r-iranges
depends = r-keggrest
depends = r-matrixstats
depends = r-multtest
depends = r-pwalign
depends = r-rbgl
depends = r-regioner
depends = r-rsamtools
depends = r-rtracklayer
depends = r-s4vectors
depends = r-scales
depends = r-stringr
depends = r-summarizedexperiment
depends = r-tibble
depends = r-tidyr
depends = r-universalmotif
depends = r-venndiagram
optdepends = r-annotationhub
optdepends = r-biocfilecache
optdepends = r-biocmanager
optdepends = r-biocstyle
optdepends = r-bsgenome
optdepends = r-bsgenome.celegans.ucsc.ce10
optdepends = r-bsgenome.drerio.ucsc.danrer7
optdepends = r-bsgenome.ecoli.ncbi.20080805
optdepends = r-bsgenome.hsapiens.ucsc.hg19
optdepends = r-bsgenome.hsapiens.ucsc.hg38
optdepends = r-delayedarray
optdepends = r-ensdb.hsapiens.v75
optdepends = r-ensdb.hsapiens.v79
optdepends = r-ensdb.hsapiens.v86
optdepends = r-go.db
optdepends = r-gplots
optdepends = r-idr
optdepends = r-knitr
optdepends = r-limma
optdepends = r-motifstack
optdepends = r-org.ce.eg.db
optdepends = r-org.hs.eg.db
optdepends = r-organismdbi
optdepends = r-reactome.db
optdepends = r-reshape2
optdepends = r-rmarkdown
optdepends = r-seqinr
optdepends = r-testthat
optdepends = r-trackviewer
optdepends = r-txdb.hsapiens.ucsc.hg18.knowngene
optdepends = r-txdb.hsapiens.ucsc.hg19.knowngene
optdepends = r-txdb.hsapiens.ucsc.hg38.knowngene
optdepends = r-upsetr
source = https://bioconductor.org/packages/release/bioc/src/contrib/ChIPpeakAnno_3.42.0.tar.gz
md5sums = 6cb7a4fe63370e10d6da076cff333797
b2sums = c1cfb42b255ae9a16d9567c109adc6791ae6f829ff811e69b3a266b19b05300e2c682a9cd647378c56178a583fe69a9dadc33d5007ff2709243a5a4637000729
pkgname = r-chippeakanno
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