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pkgbase = r-chippeakanno
pkgdesc = Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments, or any experiments that result in large number of genomic interval data
pkgver = 3.38.1
pkgrel = 1
url = https://bioconductor.org/packages/ChIPpeakAnno
arch = any
license = GPL-2.0-or-later
depends = r-annotationdbi
depends = r-biocgenerics
depends = r-biomart
depends = r-biostrings
depends = r-data.table
depends = r-dbi
depends = r-dplyr
depends = r-ensembldb
depends = r-genomeinfodb
depends = r-genomicalignments
depends = r-genomicfeatures
depends = r-genomicranges
depends = r-ggplot2
depends = r-graph
depends = r-interactionset
depends = r-iranges
depends = r-keggrest
depends = r-matrixstats
depends = r-multtest
depends = r-pwalign
depends = r-rbgl
depends = r-regioner
depends = r-rsamtools
depends = r-rtracklayer
depends = r-s4vectors
depends = r-scales
depends = r-stringr
depends = r-summarizedexperiment
depends = r-tibble
depends = r-tidyr
depends = r-universalmotif
depends = r-venndiagram
optdepends = r-annotationhub
optdepends = r-biocfilecache
optdepends = r-biocmanager
optdepends = r-biocstyle
optdepends = r-bsgenome
optdepends = r-bsgenome.celegans.ucsc.ce10
optdepends = r-bsgenome.drerio.ucsc.danrer7
optdepends = r-bsgenome.ecoli.ncbi.20080805
optdepends = r-bsgenome.hsapiens.ucsc.hg19
optdepends = r-bsgenome.hsapiens.ucsc.hg38
optdepends = r-delayedarray
optdepends = r-ensdb.hsapiens.v75
optdepends = r-ensdb.hsapiens.v79
optdepends = r-ensdb.hsapiens.v86
optdepends = r-go.db
optdepends = r-gplots
optdepends = r-idr
optdepends = r-knitr
optdepends = r-limma
optdepends = r-motifstack
optdepends = r-org.ce.eg.db
optdepends = r-org.hs.eg.db
optdepends = r-organismdbi
optdepends = r-reactome.db
optdepends = r-reshape2
optdepends = r-rmarkdown
optdepends = r-seqinr
optdepends = r-testthat
optdepends = r-trackviewer
optdepends = r-txdb.hsapiens.ucsc.hg18.knowngene
optdepends = r-txdb.hsapiens.ucsc.hg19.knowngene
optdepends = r-txdb.hsapiens.ucsc.hg38.knowngene
optdepends = r-upsetr
source = https://bioconductor.org/packages/release/bioc/src/contrib/ChIPpeakAnno_3.38.1.tar.gz
md5sums = 5235bad4fe917e070b4d059fec933143
b2sums = 341f3114b33c51403196090c1cedaa8377c2d2a2d7c102be4910485adede1ec11adfd94fb8e186aa097591222f7c1392a1c8a359a1f6fd492bd1bc58ff709fcf
pkgname = r-chippeakanno
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