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pkgbase = r-isoformswitchanalyzer
pkgdesc = Identify, Annotate and Visualize Isoform Switches with Functional Consequences from both short- and long-read RNA-seq data
pkgver = 2.8.0
pkgrel = 1
url = https://bioconductor.org/packages/IsoformSwitchAnalyzeR
arch = x86_64
license = GPL-2.0-or-later
depends = r-biobase
depends = r-biocgenerics
depends = r-biocparallel
depends = r-biostrings
depends = r-bsgenome
depends = r-dbi
depends = r-dexseq
depends = r-dplyr
depends = r-edger
depends = r-futile.logger
depends = r-genomeinfodb
depends = r-genomicranges
depends = r-ggplot2
depends = r-gridextra
depends = r-iranges
depends = r-limma
depends = r-magrittr
depends = r-pfamanalyzer
depends = r-plyr
depends = r-pwalign
depends = r-rcolorbrewer
depends = r-rcurl
depends = r-readr
depends = r-reshape2
depends = r-rtracklayer
depends = r-s4vectors
depends = r-saturn
depends = r-stringr
depends = r-summarizedexperiment
depends = r-sva
depends = r-tibble
depends = r-tidyr
depends = r-tximeta
depends = r-tximport
depends = r-venndiagram
depends = r-xvector
optdepends = r-bsgenome.hsapiens.ucsc.hg19
optdepends = r-knitr
optdepends = r-rmarkdown
source = https://bioconductor.org/packages/release/bioc/src/contrib/IsoformSwitchAnalyzeR_2.8.0.tar.gz
md5sums = 38363ce3a91427e534ea9b1c06ff3fd7
b2sums = cc6f0b7bf43f9387d16a4caca7503999301f5c7872d09e0f9539f46aa27567622c9a11c388a0b46e9dc2bc8bd13a2e4ee7ebb8822161b8661df160e87b6e9710
pkgname = r-isoformswitchanalyzer
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