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pkgbase = r-purecn
pkgdesc = Copy number calling and SNV classification using targeted short read sequencing
pkgver = 2.12.0
pkgrel = 1
url = https://bioconductor.org/packages/PureCN
arch = any
license = Artistic2.0
depends = r
depends = r-biobase
depends = r-biocgenerics
depends = r-biostrings
depends = r-data.table
depends = r-dnacopy
depends = r-futile.logger
depends = r-genomeinfodb
depends = r-genomicfeatures
depends = r-genomicranges
depends = r-ggplot2
depends = r-gridextra
depends = r-iranges
depends = r-mclust
depends = r-rcolorbrewer
depends = r-rhdf5
depends = r-rsamtools
depends = r-rtracklayer
depends = r-s4vectors
depends = r-summarizedexperiment
depends = r-variantannotation
depends = r-vgam
optdepends = r-biocparallel
optdepends = r-biocstyle
optdepends = r-covr
optdepends = r-genomicsdb
optdepends = r-jsonlite
optdepends = r-knitr
optdepends = r-markdown
optdepends = r-optparse
optdepends = r-org.hs.eg.db
optdepends = r-pscbs
optdepends = r-r.utils
optdepends = r-rmarkdown
optdepends = r-testthat
optdepends = r-txdb.hsapiens.ucsc.hg19.knowngene
source = https://bioconductor.org/packages/release/bioc/src/contrib/PureCN_2.12.0.tar.gz
sha256sums = 1ef89da087a265b5119e30cf8aa93c411f2d09eb555f5e4d3244bff330654478
pkgname = r-purecn
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