blob: 7da4c595dcd9977753c6857e40b4d864a56af759 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
|
pkgbase = vcflib
pkgdesc = C++ library and cmdline tools for parsing and manipulating VCF files doi: 10.1101/2021.05.21.445151
pkgver = 1.0.12
pkgrel = 2
url = https://github.com/vcflib/vcflib
arch = x86_64
license = MIT
makedepends = git
makedepends = cmake
makedepends = pybind11
makedepends = tabixpp
makedepends = pandoc
depends = python
depends = htslib
depends = wfa2-lib
optdepends = r: running R scripts
optdepends = perl: running Perl scripts
source = vcflib-1.0.12.tar.gz::https://github.com/vcflib/vcflib/archive/refs/tags/v1.0.12.tar.gz
source = fastahack.tar.gz::https://github.com/ekg/fastahack/archive/refs/tags/v1.0.0.tar.gz
source = git+https://github.com/ekg/filevercmp.git
source = git+https://github.com/ekg/fsom.git
source = git+https://github.com/ekg/intervaltree.git
source = git+https://github.com/edawson/libVCFH.git
source = git+https://github.com/ekg/multichoose.git
source = git+https://github.com/ekg/smithwaterman.git
source = simde::git+https://github.com/simd-everywhere/simde-no-tests.git
md5sums = 5eef989c4d172d74a6f6b280ec598808
md5sums = eeb7d046978d7633fe4d07def29f48c3
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
pkgname = vcflib
|