blob: 2f36cec7b6eb2104e27f66b123a91ca9d72be9a0 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
|
# Maintainer: Butui Hu <hot123tea123@gmail.com>
_pkgname=3dslicer
pkgname=3dslicer-git
pkgver=5.8.1.r184.cd62f821c9
pkgrel=1
pkgdesc='A free, open source and multi-platform software package widely used for medical, biomedical, and related imaging research'
arch=('x86_64')
url='https://www.slicer.org'
license=('BSD-3-Clause')
depends=(
bzip2
curl
dcmtk
fftw
gcc13-libs
glibc
hwloc
libarchive
libffi
libglvnd
libice
libnsl
libpng
libsm
libtirpc
libx11
libxcrypt
libxcursor
libxext
libxfixes
libxrender
openssl
rapidjson
qt5-base
qt5-declarative
qt5-multimedia
qt5-location
qt5-script
qt5-svg
qt5-tools
qt5-webchannel
qt5-webengine
qt5-x11extras
qt5-xmlpatterns
sqlite
teem
util-linux-libs
xz
zlib
)
makedepends=(
gcc13
gendesk
git
subversion
)
options=(!emptydirs !strip)
provides=(3dslicer=${pkgver})
conflicts=(3dslicer)
source=("${_pkgname}::git+https://github.com/Slicer/Slicer.git"
"${_pkgname}.svg::https://www.slicer.org/assets/img/3D-Slicer-Mark.svg"
"https://github.com/Kitware/CMake/releases/download/v3.31.6/cmake-3.31.6-linux-x86_64.tar.gz"
)
sha512sums=('SKIP'
'3422d244f819a7ec4c475d3d8a90c79fcb73738920c0830b100c6342ca24d5be607ba60ee3d91892402036a0adf31d5ab7c8fc83f451121a7b537f7de5306014'
'42395e20b10a8e9ef3e33014f9a4eed08d46ab952e02d2c1bbc8f6133eca0d7719fb75680f9bbff6552f20fcd1b73d86860f7f39388d631f98fb6f622b37cf04')
pkgver() {
cd "${srcdir}/${_pkgname}"
_max_tag=$(git tag --sort=-v:refname | head -n1)
_commit_count=$(git rev-list --count "${_max_tag}"..HEAD)
_commit_hash=$(git rev-parse --short HEAD)
_max_tag=$(echo "$_max_tag" | sed 's/^v//')
_full_version="${_max_tag}.r${_commit_count}.${_commit_hash}"
printf "%s" "${_full_version}"
}
prepare() {
# find sqlite with cmake's FindSQLite3
sed -i 's/find_package(${proj} REQUIRED)/find_package(SQLite3 REQUIRED)/' "${srcdir}/${_pkgname}/SuperBuild/External_sqlite.cmake"
echo "Creating desktop file"
gendesk -f -n --pkgname ${_pkgname} \
--categories "Graphics;MedicalSoftware;Science;" \
--exec "Slicer" \
--icon "${_pkgname}" \
--pkgdesc "${pkgdesc}"
}
build() {
export CC=/usr/bin/gcc-13
export CXX=/usr/bin/g++-13
# build with cmake 3.31.6, not working with cmake 4.0.0 yet
export PATH=${srcdir}/cmake-3.31.6-linux-x86_64/bin:${PATH}
cmake \
-B build -S "${srcdir}/${_pkgname}" \
-DBUILD_TESTING=OFF \
-DCMAKE_BUILD_TYPE=Release \
-DCMAKE_INSTALL_PREFIX=/usr \
-DEXTERNAL_PROJECT_OPTIONAL_CMAKE_ARGS="-DSQLite3_INCLUDE_DIRS=/usr/include;-DSQLite3_LIBRARIES=/usr/lib/libsqlite3.so" \
-DSlicer_BUILD_DOCUMENTATION=OFF \
-DSlicer_BUILD_I18N_SUPPORT=ON \
-DSlicer_STORE_SETTINGS_IN_APPLICATION_HOME_DIR=OFF \
-DSlicer_USE_GIT_PROTOCOL=OFF \
-DSlicer_USE_SYSTEM_CTK=OFF \
-DSlicer_USE_SYSTEM_CTKAPPLAUNCHER=OFF \
-DSlicer_USE_SYSTEM_CTKAppLauncherLib=OFF \
-DSlicer_USE_SYSTEM_DCMTK=ON \
-DSlicer_USE_SYSTEM_ITK=OFF \
-DSlicer_USE_SYSTEM_JsonCpp=OFF \
-DSlicer_USE_SYSTEM_LZMA=ON \
-DSlicer_USE_SYSTEM_LibArchive=ON \
-DSlicer_USE_SYSTEM_LibFFI=ON \
-DSlicer_USE_SYSTEM_OpenSSL=ON \
-DSlicer_USE_SYSTEM_PCRE=OFF \
-DSlicer_USE_SYSTEM_QT=ON \
-DSlicer_USE_SYSTEM_RapidJSON=ON \
-DSlicer_USE_SYSTEM_SimpleITK=OFF \
-DSlicer_USE_SYSTEM_SlicerExecutionModel=OFF \
-DSlicer_USE_SYSTEM_Swig=OFF \
-DSlicer_USE_SYSTEM_VTK=OFF \
-DSlicer_USE_SYSTEM_bzip2=ON \
-DSlicer_USE_SYSTEM_curl=ON \
-DSlicer_USE_SYSTEM_qRestAPI=OFF \
-DSlicer_USE_SYSTEM_sqlite=ON \
-DSlicer_USE_SYSTEM_tbb=OFF \
-DSlicer_USE_SYSTEM_teem=ON \
-DSlicer_USE_SYSTEM_zlib=ON \
-DSlicer_USE_SimpleITK=ON \
-DSlicer_USE_SimpleITK_SHARED=ON
make -C "build"
}
package() {
make -C "${srcdir}/build/Slicer-build" package
install -d "${pkgdir}/opt/${_pkgname}" "${pkgdir}/usr/bin"
tar xvf "${srcdir}/build/Slicer-build/"*.tar.gz -C "${pkgdir}/opt/${_pkgname}" --strip-components 1
ln -s /opt/${_pkgname}/Slicer "${pkgdir}/usr/bin"
install -Dm644 "${srcdir}/${_pkgname}.desktop" "${pkgdir}/usr/share/applications/${_pkgname}.desktop"
install -Dm644 "${srcdir}/${_pkgname}.svg" "${pkgdir}/usr/share/pixmaps/${_pkgname}.svg"
}
# vim:set ts=2 sw=2 et:
|