PKGBUILD


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# Contributor: Stephen Checkley <scheckley at gmail dot com>
# Contributor: jrohwer
pkgname=copasi-bin
pkgver=4.40.278
_pkgver=${pkgver##*.}
pkgrel=1
pkgdesc="COmplex PAthway SImulator for analysis of biochemical networks and their dynamics"
arch=('i686' 'x86_64')
url="https://copasi.org"
license=('custom:Artistic 2.0')
depends=(shared-mime-info freetype2 glu)
source=(copasi-desktop.tar.gz)
install=copasi.install
noextract=($pkgname-$pkgver.tar.gz)
_source=https://github.com/copasi/COPASI/releases/download/Build-$_pkgver
source_i686=($pkgname-$pkgver.sh::$_source/COPASI-$pkgver-Linux-32bit.sh)
source_x86_64=($pkgname-$pkgver.sh::$_source/COPASI-$pkgver-Linux-64bit.sh)
sha512sums=('cf7172b155885db8007298643499a57421e4890b72da86f8124bc35ec30c39f17c4167cd5d4603fc37c0cf72c6e4283c009339363da1cc5f44708c08d16a2b4e')
sha512sums_i686=('f6c27a4fac99feef6c5d0c6e337344638718287c229a57da24dcdf1f21acb32c0f443ee17bcbce72e019fdb40ffe37e187b0d06fee19b1021a823642da8dc9c6')
sha512sums_x86_64=('9a94fa9e42b04eb058cb8f81ea090dfe55759d2162d8334603397d1838de7cd09f365b6aed056824aa91b57be3fb3015b3e7c0e91e793a63c90c270fc5b2ce37')

package() {
  MACHINE_TYPE=$(uname -m)
  if [ ${MACHINE_TYPE} == 'x86_64' ]; then
    arch_flag=64bit
  else
    arch_flag=32bit
  fi

  cd "$srcdir"
  sh $pkgname-$pkgver.sh -e $(pwd)

  cd "$srcdir"/COPASI-${pkgver}-Linux-${arch_flag}
  rm share/copasi/lib/libfreetype.so.6
  ln -s /usr/lib/libfreetype.so share/copasi/lib/
  ln -s /usr/lib/libfreetype.so.6 share/copasi/lib/

  # install program files
  install -d "$pkgdir"/usr/{bin,share}
  install -m755 bin/* "$pkgdir"/usr/bin
  cp -R share/copasi "$pkgdir"/usr/share/

  # desktop integration...
  cd "$srcdir"/copasi-desktop
  install -Dm755 copasi.sh "$pkgdir/etc/profile.d/copasi.sh"
  install -Dm644 copasi.desktop "$pkgdir/usr/share/applications/copasi.desktop"
  install -Dm644 copasi.xml "$pkgdir/usr/share/mime/packages/copasi.xml"
  install -d "$pkgdir/usr/share/icons/hicolor"
  cp -R icons/* "$pkgdir/usr/share/icons/hicolor/"
  # copasi starts CopasiUI after setting COPASIDIR environment variable
  # useful for launching COPASI using the menu entry
  install -Dm755 copasi "$pkgdir/usr/bin/copasi"
}