blob: 04bc1e90132fce4b663020e7bc19213c75f16962 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
|
# Maintainer: bipin Kumar <kbipinkumar@pm.me>
pkgname=hifiasm
pkgver=0.19.9
pkgrel=1
pkgdesc="Haplotype-resolved de novo assembler for PacBio Hifi reads. https://doi.org/10.1038/s41592-020-01056-5"
arch=(x86_64)
url="https://github.com/chhylp123/hifiasm"
license=('MIT')
depends=('glibc' 'gcc-libs' 'zlib')
source=(
"$pkgname-$pkgver.tar.gz::"https://github.com/chhylp123/hifiasm/archive/refs/tags/${pkgver}.tar.gz""
"LDFLAG.patch::"https://patch-diff.githubusercontent.com/raw/chhylp123/hifiasm/pull/484.patch""
)
b2sums=('144455148bacb4f438186dd39110fde8b205d0d90c80a780bfca7c0aa1ddbb276b4ff0c97e244ba448aa504de7009541de1e9efbb28cf0f21073ab9c0176d784'
'6fa4df620ac4f10991702edaf155982ad7730d09caf69774403a1843f0668d00c9bdbe1c9c8ba20c56f7b2b214292da8184ed665a8e0812a0aa0119c20ae70fc')
prepare() {
cd ${pkgname}-${pkgver}
patch -p1 < ${srcdir}/LDFLAG.patch
}
build() {
cd ${pkgname}-${pkgver}
export LDFLAGS="-Wl,-z,relro,-z,now"
make
}
package() {
cd ${pkgname}-${pkgver}
install -Dm755 hifiasm "$pkgdir"/usr/bin/hifiasm
install -Dm644 LICENSE "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE"
mkdir -p ${pkgdir}/usr/share/man/man1/
cp hifiasm.1 ${pkgdir}/usr/share/man/man1/hifiasm.1
}
|