PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=AgiMicroRna
_pkgver=2.54.0
pkgname=r-${_pkgname,,}
pkgver=2.54.0
pkgrel=1
pkgdesc='Processing and Differential Expression Analysis of Agilent microRNA chips'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
  r
  r-affy
  r-affycoretools
  r-biobase
  r-limma
  r-preprocesscore
)
optdepends=(
  r-codelink
  r-gdata
  r-geneplotter
  r-gplots
  r-gtools
  r-marray
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('427378b7d953a52da83a997592cd96a5a08c11f00b9ce810e90eb4d75ccfa8ae')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: