blob: 5750cf51aabe92016aa47ce742d79f8ad703a36e (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=altcdfenvs
_pkgver=2.72.0
pkgname=r-${_pkgname,,}
pkgver=2.72.0
pkgrel=1
pkgdesc='alternative CDF environments (aka probeset mappings)'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-affy
r-biobase
r-biocgenerics
r-biostrings
r-hypergraph
r-makecdfenv
r-s4vectors
)
optdepends=(
r-hgu133a.db
r-hgu133acdf
r-hgu133aprobe
r-hgu95acdf
r-plasmodiumanophelescdf
r-rcolorbrewer
r-rgraphviz
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('ac0456aa06b4b6956a5e968af7c168b33678d6f9be0714b10d708cd9c8540c2c')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|