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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=AneuFinder
_pkgver=1.30.0
pkgname=r-${_pkgname,,}
pkgver=1.30.0
pkgrel=1
pkgdesc='Analysis of Copy Number Variation in Single-Cell-Sequencing Data'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-aneufinderdata
r-bamsignals
r-biocgenerics
r-biostrings
r-cowplot
r-dnacopy
r-doparallel
r-ecp
r-foreach
r-genomeinfodb
r-genomicalignments
r-genomicranges
r-ggdendro
r-ggplot2
r-ggrepel
r-iranges
r-mclust
r-reshape2
r-rsamtools
r-s4vectors
)
optdepends=(
r-biocstyle
r-bsgenome.hsapiens.ucsc.hg19
r-bsgenome.mmusculus.ucsc.mm10
r-knitr
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('34604a3d07d9c641280706ba3c2dad4b7e6e57bd50bf8e2916e105162430fb74')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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