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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
# Contributor: Guoyi Zhang <guoyizhang at malacology dot net>
# Contributor: Nick B <Shirakawasuna at gmail _dot_com>
_pkgname=AnnotationDbi
_pkgver=1.70.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Manipulation of SQLite-based annotations in Bioconductor"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
r-biobase
r-biocgenerics
r-dbi
r-iranges
r-keggrest
r-rsqlite
r-s4vectors
)
optdepends=(
r-annotationforge
r-biocstyle
r-ensdb.hsapiens.v75
r-go.db
r-graph
r-hgu95av2.db
r-knitr
r-org.at.tair.db
r-org.hs.eg.db
r-org.sc.sgd.db
r-reactome.db
r-runit
r-txdb.hsapiens.ucsc.hg19.knowngene
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('402038908b3bfbf71f7757486df980ae')
b2sums=('64f93c05279f90619b115096b6eeed23c3f369c7fc8c5af8ab2620fe24731ae75238945eb287f2eb62e1ce91a7c9318009175c82150f962085ae91cb19cf18b7')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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