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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=AnnotationHub
_pkgver=3.10.1
pkgname=r-${_pkgname,,}
pkgver=3.10.1
pkgrel=1
pkgdesc='Client to access AnnotationHub resources'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-annotationdbi
r-biocfilecache
r-biocgenerics
r-biocmanager
r-biocversion
r-curl
r-dplyr
r-httr
r-interactivedisplaybase
r-rappdirs
r-rsqlite
r-s4vectors
r-yaml
)
optdepends=(
r-annotationforge
r-annotationhubdata
r-biocstyle
r-biostrings
r-compounddb
r-ensembldb
r-experimenthub
r-gdsfmt
r-genomeinfodb
r-genomicfeatures
r-genomicranges
r-hubpub
r-iranges
r-keras
r-knitr
r-msnbase
r-mzr
r-rbiopaxparser
r-rmarkdown
r-rsamtools
r-rtracklayer
r-runit
r-summarizedexperiment
r-variantannotation
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('dd974316cea658f5ad099d92fe2cdcb19e77edc11e19a11ce30bbdfac6296c8b')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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