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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=AnnotationHubData
_pkgver=1.32.1
pkgname=r-${_pkgname,,}
pkgver=1.32.1
pkgrel=1
pkgdesc='Transform public data resources into Bioconductor Data Structures'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-annotationdbi
r-annotationforge
r-annotationhub
r-biobase
r-bioccheck
r-biocgenerics
r-biocmanager
r-biocviews
r-biostrings
r-dbi
r-futile.logger
r-genomeinfodb
r-genomicfeatures
r-genomicranges
r-graph
r-iranges
r-jsonlite
r-organismdbi
r-rcurl
r-rsamtools
r-rsqlite
r-rtracklayer
r-s4vectors
r-xml
)
optdepends=(
r-biocstyle
r-genomeinfodbdata
r-grasp2db
r-hubpub
r-knitr
r-rmarkdown
r-runit
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('b59ea2632ce440ef7a3ae7ac1c219b5f10a897b0d2397973147253319cb4a227')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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