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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=AnVIL
_pkgver=1.20.4
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Bioconductor on the AnVIL compute environment"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
r-biocbaseutils
r-dplyr
r-dt
r-futile.logger
r-htmltools
r-httr
r-jsonlite
r-miniui
r-rapiclient
r-rlang
r-shiny
r-tibble
r-tidyr
r-tidyselect
r-yaml
r-anvilbase
)
optdepends=(
r-biocstyle
r-devtools
r-knitr
r-readr
r-rmarkdown
r-testthat
r-withr
r-anvilaz
r-anvilgcp
r-lifecycle
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('d0e18f9e1f16d4d1fcf9aa6fa07a20e2')
b2sums=('95e12f600b5cd54c1c343f55286f83355a254a0c2e574b34ab9dd15c275fdb7f69cb6a35c10257cfbf3957367ca1378c308f0644b99e447a98ebb643e3ed4926')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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