blob: 19cc11594ee1461f7f4d5993e1b36af19abf5fac (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=aroma.affymetrix
_pkgver=3.2.2
pkgname=r-${_pkgname,,}
pkgver=3.2.2
pkgrel=1
pkgdesc='Analysis of Large Affymetrix Microarray Data Sets'
arch=('any')
url="https://cran.r-project.org/package=${_pkgname}"
license=('LGPL')
depends=(
r
r-aroma.apd
r-aroma.core
r-future
r-listenv
r-matrixstats
r-r.cache
r-r.devices
r-r.filesets
r-r.methodss3
r-r.oo
r-r.utils
)
optdepends=(
r-affxparser
r-affy
r-affymetrixdatatestfiles
r-affyplm
r-aroma.light
r-biobase
r-biocgenerics
r-dbi
r-dchipio
r-gcrma
r-gsmoothr
r-limma
r-oligo
r-oligoclasses
r-pdinfobuilder
r-preprocesscore
r-rcolorbrewer
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('18e1c9479e3e41bdfff06769d0ff2d85fcae16042cfd0eefa4dbcd0c4f3c9c40')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|