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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=ASAFE
_pkgver=1.30.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Ancestry Specific Allele Frequency Estimation"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
  r
)
optdepends=(
  r-knitr
  r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('8d2f95c5accaf3c385b85d8d5be5b980')
b2sums=('01b804a6f9bf2019a601422767ebef6232abcdd6653329cf75ddb01729c0a5ef464e0499c2ef93e177e2b38d44ae07d0e607063111e7b72bae5afa6e42df1a1d')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}