PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=BADER
_pkgver=1.42.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Bayesian Analysis of Differential Expression in RNA Sequencing Data"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-2.0-only')
depends=(
  r
)
optdepends=(
  r-pasilla
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('aaf447ad9ca8128a96dc20e04a346154')
b2sums=('79fd30a9b935c2d86ee58d37c2ca3f25b69e664192767da43ca96f74c418651c344489c3c1fca17e20bda42603736b251e8e6e355e91ed83c93d92097624a6bc')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}