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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=beadarray
_pkgver=2.56.0
pkgname=r-${_pkgname,,}
pkgver=2.56.0
pkgrel=1
pkgdesc='Quality assessment and low-level analysis for Illumina BeadArray data'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-annotationdbi
r-beaddatapackr
r-biobase
r-biocgenerics
r-genomicranges
r-ggplot2
r-hexbin
r-illuminaio
r-iranges
r-limma
r-reshape2
)
optdepends=(
r-affy
r-beadarrayexampledata
r-biocstyle
r-ggbio
r-gridextra
r-hwriter
r-illuminahumanv3.db
r-knitr
r-lumi
r-nozzle.r1
r-txdb.hsapiens.ucsc.hg19.knowngene
r-vsn
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('eda8f66e30ab1e4cf7005b2b7b44a36668b9a17174bc139e145e0c6cb6a414ce')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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