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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=BindingSiteFinder
_pkgver=2.0.0
pkgname=r-${_pkgname,,}
pkgver=2.0.0
pkgrel=1
pkgdesc='Binding site defintion based on iCLIP data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-complexheatmap
r-dplyr
r-forcats
r-genomeinfodb
r-genomicfeatures
r-genomicranges
r-ggdist
r-ggforce
r-ggplot2
r-iranges
r-kableextra
r-lifecycle
r-matrixstats
r-plyr
r-rcolorbrewer
r-rlang
r-rtracklayer
r-s4vectors
r-tibble
r-tidyr
)
optdepends=(
r-ashr
r-biocstyle
r-deseq2
r-genomicalignments
r-ggally
r-ggplotify
r-ggpointdensity
r-ggrastr
r-gviz
r-knitr
r-patchwork
r-rmarkdown
r-scales
r-summarizedexperiment
r-testthat
r-viridis
r-xlsx
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('be996dd54ecce1079d7e2601a419b3639e5cf495e0d0a2500171c9f621c2c4a9')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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