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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=biomaRt
_pkgver=2.60.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Interface to BioMart databases (i.e. Ensembl)"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
r-annotationdbi
r-biocfilecache
r-digest
r-httr2
r-progress
r-rappdirs
r-stringr
r-xml2
)
optdepends=(
r-biocstyle
r-httptest2
r-knitr
r-mockery
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('c0a5e3d450e119dfd62a5d665f6f596e')
b2sums=('453c71d3dd75f1f118c6c55bf4551c4c5de3e9c09fbd70fad1d0f8e03cea29ad32e0b0ac221328a2809bdc393b372e947d7118425fe27ece4ab6291c22b55a6e')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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