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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=biomaRt
_pkgver=2.62.1
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Interface to BioMart databases (i.e. Ensembl)"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
r-annotationdbi
r-biocfilecache
r-curl
r-digest
r-httr2
r-progress
r-rappdirs
r-stringr
r-xml2
)
optdepends=(
r-biocstyle
r-httptest2
r-knitr
r-mockery
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('722924dcf24dadd2b61eb9130d02610c')
b2sums=('d794c703ef97eaeb06ae0eaa48e97060e80f272d4cc61a583c3d3ecd52c88e58d3a0219b7f2c1ea0018b4600b217968fc4ad72e03827e24e09200aa17805d43a')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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