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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
# Contributor: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com

_pkgname=CGEN
_pkgver=3.48.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="An R package for analysis of case-control studies in genetic epidemiology"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-2.0-only')
depends=(
  r-mvtnorm
)
makedepends=(
  gcc-fortran
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('c9bf3e0f1a4b453e7921777eeb1b3e16')
b2sums=('a9bb0d26bb128784f438ca58ef9fbf5a035f4b5992133bada6322049f70c0196a4c11a42c8e920b1eb05680e0fc54d7dbc775920dfe15a3d91046eb7f07cb8c9')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}