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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=ChIPXpress
_pkgver=1.46.0
pkgname=r-${_pkgname,,}
pkgver=1.46.0
pkgrel=1
pkgdesc='ChIPXpress: enhanced transcription factor target gene identification from ChIP-seq and ChIP-chip data using publicly available gene expression profiles'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-affy
r-biganalytics
r-bigmemory
r-biobase
r-chipxpressdata
r-frma
r-geoquery
)
optdepends=(
r-biocgenerics
r-mouse4302.db
r-mouse4302cdf
r-mouse4302frmavecs
r-runit
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('4560c4c1e2dfabd4264bba5a2b083feeefc32a9a7e1152efc9ec12f2b7615210')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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